SEP IRA: Do I calculate my 20% contribution on net income (after tax/deductions) or Schedule C net profit figure?
I'm getting so confused about calculating my SEP IRA contribution limit and have two completely different answers from different sources. My brain is absolutely fried trying to figure this out! One YouTube video I watched showed a guy using the net profit figure directly from Schedule C (the same number carried over to self-employment tax), then subtracting half of the self-employment tax (7.65%), and using that resulting figure to calculate the 20% contribution. For example: $85,000 (net profit) minus one-half of self-employment tax (about $6,000) = $79,000 × 20% = $15,800 maximum contribution But then on several other websites, I'm reading that the 20% contribution should be calculated from my net income after ALL deductions and taxes? So I'm totally confused about which figure to use as my base. This makes a significant difference in how much I can put away for retirement! I'm trying to max out my contribution for last year before the tax deadline, but I don't want to over-contribute and cause problems. Has anyone dealt with this specifically? Which figure is the correct one to use for SEP IRA calculations?
26 comments


Ayla Kumar
The confusion is understandable! For a SEP IRA, self-employed individuals can contribute up to 20% of their "net self-employment income," but the definition of that term is where people get confused. The correct method is what you saw in that video. You start with your Schedule C net profit, then subtract half of your self-employment tax. This adjusted amount is what you calculate your 20% from. So your example is right: If you have $85,000 net profit on Schedule C, you'd subtract about $6,000 (half of SE tax), giving you $79,000. Then 20% of that would be your maximum contribution limit (around $15,800). The reason for subtracting half the SE tax is because that portion is considered a business expense. This gives you your true "net earnings from self-employment" for retirement contribution purposes.
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Lorenzo McCormick
•Thanks for explaining, but does this change if I have other deductions besides the SE tax? Like health insurance premiums or HSA contributions? Do those affect my SEP calculation base too?
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Ayla Kumar
•Great question! Self-employed health insurance premiums and HSA contributions don't reduce your net earnings for SEP IRA calculation purposes. They're deducted on your 1040, but don't affect your Schedule C net profit which is the starting point for SEP calculations. The only adjustment you make to Schedule C net profit is subtracting half of the self-employment tax before calculating your 20%. This is because the IRS considers that half of SE tax to be a business expense.
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Carmella Popescu
After struggling with this exact same issue last year, I discovered taxr.ai (https://taxr.ai) which completely saved me from making a costly mistake with my SEP IRA calculations. I was about to over-contribute by almost $4,000 because I was using the wrong base figure! The tool analyzed my Schedule C and confirmed what the first commenter said - you need to use your Schedule C net profit, subtract half of your self-employment tax, and then calculate 20% of that result. It explained the whole calculation process step-by-step and even showed how the contribution limit connects to other parts of my tax return.
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Kai Santiago
•Does it handle other retirement accounts too? I have both a SEP IRA and a solo 401k and I'm never sure if I'm calculating the limits correctly, especially with the interaction between them.
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Lim Wong
•I'm a bit skeptical about these tax tools. How accurate is it compared to what a CPA would tell you? I've been burned before by tax software giving me incorrect info.
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Carmella Popescu
•It definitely handles multiple retirement accounts! I actually had the same situation with both a SEP and a traditional IRA, and it explained all the interaction limits and showed me how to maximize my contributions across both accounts without going over any limits. As for accuracy, I actually had my CPA review the results and he confirmed everything was correct. What makes it different is that it specifically analyzes your actual tax documents rather than just giving generic advice. After using it, I showed the results to my accountant who said it was the same calculation method he uses.
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Lim Wong
I have to admit I was wrong about taxr.ai. After our discussion here, I decided to try it because I realized I've been calculating my SEP contributions incorrectly for YEARS. The tool analyzed my Schedule C and showed me exactly where I'd been making mistakes. Turns out I've been leaving almost $3,200 on the table each year by undercontributing to my SEP IRA! It showed me exactly how to calculate the 20% (which is actually closer to 19.6% of Schedule C profit due to how the deduction for half of SE tax affects things). I've already adjusted my contributions for this year based on the correct calculation. The thing that impressed me most was how it explained WHY the calculation works this way - something neither my previous accountant nor any other resources ever made clear.
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Dananyl Lear
If you're still trying to figure out your SEP IRA contribution and need to call the IRS for clarification, good luck getting through to them! I spent THREE DAYS trying to reach someone at the IRS about this exact issue last year. I finally discovered Claimyr (https://claimyr.com) which got me connected to an actual IRS agent in under 20 minutes. You can see how it works here: https://youtu.be/_kiP6q8DX5c The agent walked me through the entire SEP calculation process and confirmed that it's 20% of net earnings from self-employment, which is your Schedule C profit minus half your self-employment tax. She even referenced the specific IRS publication that covers this (Pub 560).
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Noah huntAce420
•Wait, how exactly does this work? I thought it was impossible to get through to the IRS these days. Do they just keep calling for you or something?
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Ana Rusula
•Yeah right, I've heard promises like this before. There's no way anyone is getting through to the IRS in 20 minutes during tax season. They put you on hold for hours even if you call at weird hours.
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Dananyl Lear
•It works by using a callback system that continuously calls the IRS for you and secures your place in line. Once they reach an agent, you get a call connecting you directly to that person. No more sitting on hold for hours! The system is pretty simple - you enter your phone number, they call you when they've reached an IRS agent, and then you're connected. I was skeptical too until I tried it. The 20 minutes was my actual experience, though I imagine wait times vary depending on the time of year and day of the week.
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Ana Rusula
I'm eating my words about Claimyr. After I posted that skeptical comment, I was still desperately trying to get an answer about my SEP calculation before the tax deadline, so I gave it a shot. Got connected to an IRS tax specialist in about 35 minutes (not quite 20, but WAY better than my previous attempts). The agent confirmed exactly what everyone here said - use Schedule C net profit, subtract half of SE tax, then calculate 20% of that. The agent also mentioned something nobody else pointed out - there's actually a specific worksheet in Publication 560 that walks through this calculation step by step. I would have never found this on my own after hours of searching online. Saved me from making a $2,800 error on my taxes this year. Sometimes being proven wrong is the best thing that can happen!
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Fidel Carson
I think there's actually a simpler way to look at this. The SEP contribution limit for self-employed people is EFFECTIVELY about 20% of your Schedule C profit, but TECHNICALLY it's 25% of your "compensation." For self-employed people, your "compensation" is your net earnings minus the deduction for the contribution itself and half of self-employment tax. This creates a circular calculation that effectively reduces the 25% to about 20% of your Schedule C net profit. That's why many advisors just say "20% of net profit" as a simpler approximation rather than walking through the more complex actual calculation.
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Isaiah Sanders
•Wait, so is it 20% or 25%? Now I'm even more confused! Can you walk through a simple example with numbers?
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Fidel Carson
•The actual limit is 25% of your "compensation" but because of how "compensation" is defined for self-employed individuals, it works out to about 20% of your Schedule C profit. Let's use a simple example with round numbers: Say your Schedule C profit is $100,000. Half of your SE tax would be about $7,650. So your "net earnings from self-employment" is $92,350. The maximum contribution is actually calculated as $92,350 ÷ 1.25 × 0.25 = $18,470, which is about 18.47% of your original $100,000 profit. That's why most people just say "approximately 20% of your Schedule C profit" as a simplified rule of thumb, even though the actual calculation is a bit more complex.
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Xan Dae
Has anyone used a specific tax software that calculates this correctly? I tried using TurboSelf-Employed last year and I think it may have used the wrong figure for my SEP calculation.
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Fiona Gallagher
•I've had good luck with FreeTaxUSA handling this calculation correctly. It specifically asks for your SEP contribution amount but then will tell you if you've exceeded the maximum allowed based on your Schedule C income. It seems to use the correct calculation (Schedule C net - 1/2 SE tax, then ~20%).
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Donna Cline
Just wanted to add my experience here since I went through this exact confusion last year. I'm a freelance consultant and was getting wildly different answers from various online calculators. What finally cleared it up for me was actually calling my plan administrator (the company that manages my SEP IRA). They walked me through it and confirmed what most people here are saying: it's 20% of your net earnings from self-employment, which is Schedule C profit minus half of your self-employment tax. The key insight they gave me was that this isn't just some arbitrary rule - it's designed to make self-employed people equivalent to employees who get employer contributions. Since employees don't pay the "employer portion" of Social Security/Medicare taxes, self-employed people get to subtract that equivalent amount (half of SE tax) before calculating their retirement contribution. For what it's worth, I ended up contributing $16,200 on $85,000 of Schedule C income after subtracting about $6,100 for half my SE tax. That worked out to almost exactly 20% of the adjusted amount, just like the examples people have been sharing here.
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Tristan Carpenter
•This is really helpful context about why the calculation works this way! I never understood the reasoning behind subtracting half the SE tax before. That explanation about making self-employed people equivalent to employees makes perfect sense. As a newcomer to self-employment, these kinds of insights about the "why" behind the rules are just as valuable as knowing the calculation itself. Thanks for sharing your real numbers too - it helps to see concrete examples rather than just theoretical explanations.
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Diego Flores
Thank you all for this incredibly detailed discussion! As someone who just started freelancing this year, I was completely overwhelmed trying to figure out SEP IRA contributions. The explanations here have been a lifesaver. I especially appreciate how multiple people confirmed the same calculation method with real examples. It's reassuring to see that whether you call the IRS directly, use specialized tools, or work with your plan administrator, everyone is getting the same answer: Schedule C net profit minus half of self-employment tax, then calculate ~20% of that result. The insight about why we subtract half the SE tax (to make self-employed people equivalent to employees) really helped it click for me. I've bookmarked this thread and will definitely be referring back to it when I do my taxes next year. Thanks for taking the time to share your experiences and work through the confusion together!
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Natalie Adams
•Welcome to the self-employment world! I'm glad this discussion helped clarify things for you. One thing I'd add as someone who's been through a few tax seasons as a freelancer - don't forget to also think about quarterly estimated tax payments if you haven't already. Since we don't have employers withholding taxes, the IRS expects us to pay as we go throughout the year. The same income figures you're using for your SEP IRA calculations will help you estimate what you'll owe in taxes. It's another piece of the self-employment puzzle that caught me off guard my first year!
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Chloe Martin
This thread has been incredibly educational! I'm new to self-employment and was completely lost on SEP IRA calculations. What really helped me understand was seeing the consistent message across all the different approaches people tried - whether through tax software, calling the IRS, or using specialized tools, everyone confirmed the same basic formula. For anyone else just starting out like me, here's what I took away: Start with your Schedule C net profit, subtract half of your self-employment tax (the "employer portion"), then calculate approximately 20% of that adjusted amount. That's your maximum SEP IRA contribution limit. The explanation about why we subtract half the SE tax (to make us equivalent to W-2 employees) was the lightbulb moment for me. It's not just an arbitrary rule - there's actual logic behind it. I feel much more confident about handling my retirement contributions now, and I know exactly where to look for help if I get stuck again. Thanks everyone for sharing your real experiences and walking through the calculations with actual numbers!
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Monique Byrd
•Thank you for summarizing this so clearly! As another newcomer to self-employment, I really appreciate how you broke down the key takeaways. The consistency across all the different methods people used really does give confidence that we're getting the right information. I was initially skeptical about some of the tools mentioned, but seeing multiple people confirm the same calculation through different channels (IRS directly, tax software, plan administrators) makes me feel much better about the accuracy. Your point about the logic behind subtracting half the SE tax is spot on - understanding the "why" makes it so much easier to remember the calculation correctly. This whole thread is going to be my go-to reference when tax season comes around!
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Ana Erdoğan
As someone who just went through this exact same confusion last month, I can confirm what everyone here is saying is correct! I was getting completely different numbers depending on which online calculator I used, and it was driving me crazy. What finally helped me was finding the actual IRS Publication 560 that someone mentioned earlier. There's a worksheet on page 18 that walks through the calculation step by step. It's basically: Schedule C net profit → subtract half of SE tax → multiply by roughly 20% (or more precisely, divide by 1.25 then multiply by 0.25). For my $75,000 Schedule C profit, I subtracted about $5,300 (half SE tax) to get $69,700, then calculated 20% of that for a max contribution of about $13,940. The key insight for me was realizing this isn't just some random tax rule - it's designed to put us self-employed folks on equal footing with employees who have employer 401k contributions. Once I understood the reasoning, the calculation made so much more sense. Thanks to everyone who shared their real numbers and experiences - it really helps to see concrete examples rather than just theoretical explanations!
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Carmen Lopez
•Thank you for mentioning Publication 560! As someone brand new to all of this, having the actual IRS source document is incredibly helpful. I've been relying on various online articles and videos, but knowing there's an official worksheet on page 18 gives me much more confidence. Your real example with the $75,000 Schedule C profit really helps me visualize how this works in practice. I'm planning to download that publication tonight and work through the worksheet with my own numbers. It's reassuring to see yet another confirmation of the same calculation method - starting to feel like I can actually handle this self-employment tax stuff after all!
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