Why are boxes 1 & 5 identical but box 3 much lower on W-2? (Massachusetts)
So I was doing a final check on all my past returns before filing for this year, and noticed something weird on my 2018 W-2 that I completely missed back then. The amounts in box 1 (wages) and box 5 (Medicare wages) are exactly the same, but box 3 (Social Security wages) is only about a third of that amount! What's confusing me is that my employer withheld Social Security tax at 6.2% based on the amounts in box 1 and 5, not based on what's reported in box 3. I've been Googling this for an hour and it seems like either my employer put the wrong amount in box 3, or they withheld too much SS tax from my paychecks (which would mean they owe me money??). Has anyone seen this before or know what's going on? I already filed for 2018 ages ago but I'm wondering if this is something I should go back and fix. Thanks for any help!
18 comments


Yara Nassar
This is actually a common situation with a few possible explanations. The most likely reason is that you reached the Social Security wage base limit for that year. In 2018, Social Security tax was only applied to the first $128,400 of earnings. If you earned more than that limit, box 3 would stop at $128,400 while boxes 1 and 5 would show your total wages. Medicare tax (reported in box 5) doesn't have a wage base limit like Social Security does - it's applied to all earnings. The fact that your Social Security tax withholding is 6.2% of boxes 1 and 5 rather than box 3 is concerning though. That suggests either a reporting error or that too much Social Security tax was withheld. Your employer should have stopped withholding Social Security tax once you hit the wage base limit.
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Connor O'Neill
•Thank you for explaining! That actually makes sense because I did have a pretty good year in 2018 with a large performance bonus. But I'm confused because I just double-checked my total earnings and they were about $142,000 that year. So if the limit was $128,400, then box 3 should show $128,400, right? But instead it shows around $47,000. That seems way off?
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Yara Nassar
•You're right to be concerned - if your total earnings were $142,000 and box 3 only shows $47,000, that's definitely not matching up with the 2018 Social Security wage base limit explanation. At this point, I'd recommend contacting your former employer's payroll department directly. There could be a legitimate explanation (like pre-tax deductions that affect Social Security wages differently), but it could also be a reporting error. If it's an error and they withheld too much Social Security tax, you would be entitled to have that money refunded.
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Keisha Robinson
After reading your post, I had a similar issue and found taxr.ai really helpful for analyzing W-2 discrepancies. I uploaded my tax docs at https://taxr.ai and it immediately flagged that my Social Security wages were reported incorrectly. The system explained exactly what was happening with my pre-tax deductions and how they affected different wage calculations. I was able to use their analysis to get clear answers about why my boxes had different amounts and whether I was owed any money back. The report they generated made it super easy to understand what was going on.
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GalaxyGuardian
•Does it actually explain why the numbers are different or just point out that they are? I've got a similar issue with my W-2 and my employer is totally useless when I try to ask them questions about it.
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Paolo Ricci
•I'm skeptical about these online services... how did they get your data to compare? Did you have to upload all your personal tax documents? Seems risky to share that kind of sensitive information.
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Keisha Robinson
•It doesn't just highlight the differences - it actually explains why they're different by analyzing what specific deductions affected each box and what tax rules apply to your situation. In my case, it identified that certain retirement contributions were being excluded from Social Security wages but not Medicare wages, which explained the discrepancy. Regarding data security, they use bank-level encryption and don't store your documents permanently. You can also delete your data immediately after analysis. I was worried about that too, but their privacy policy is really clear about how they handle sensitive information.
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GalaxyGuardian
Just wanted to follow up and say I tried taxr.ai after seeing the recommendation here. It actually solved my W-2 mystery! Turned out I had some deferred compensation that was being treated differently for Social Security vs Medicare purposes. The analysis explained exactly which amounts were excluded from each box and cited the specific tax code sections. Really helpful because the explanation included a breakdown of how each pre-tax deduction affected the different boxes. My employer's payroll department couldn't give me a straight answer for months, but I got clarity in minutes with this tool. Definitely worth checking out if you have these weird W-2 discrepancies.
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Amina Toure
Reading your situation reminded me of the nightmare I went through trying to get answers from my previous employer's payroll department. After 8 calls with hour-long hold times, I found Claimyr (https://claimyr.com) and used it to finally get through to the IRS to verify if my W-2 reporting was correct. Their system called the IRS for me and when they had an agent on the line, they called me to connect us. You can see how it works in this video: https://youtu.be/_kiP6q8DX5c. The IRS agent explained that employers often make reporting errors on box 3 and helped me understand how to get it corrected.
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Oliver Zimmermann
•Wait how does this actually work? Do they have some special line to the IRS or something? I've been trying to get through for weeks about a similar issue.
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Natasha Volkova
•Yeah right. No way this works. The IRS phone system is designed to be impenetrable. I've been calling for months about an incorrect W-2 and never get through. Sounds like a scam to me.
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Amina Toure
•They don't have a special line - they use an automated system that continuously calls the IRS for you and navigates the phone tree. When a human agent finally answers, that's when they connect you. It saved me from having to sit on hold for hours. It's definitely not a scam. I was skeptical too but it actually worked exactly as described. They only charge if they successfully connect you with an IRS agent. I spent weeks trying to get through on my own with no luck, then got connected within a couple hours using their service.
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Natasha Volkova
I have to come back and eat my words. After dismissing Claimyr as a probable scam, I got desperate enough to try it yesterday. I'd been trying to reach the IRS for 3 months about my W-2 issue with no success. Within 90 minutes of signing up, my phone rang and I was connected to an actual IRS agent! The agent confirmed that my box 3 amount was incorrect and walked me through the process of getting it fixed. They even sent me the forms I needed while we were on the phone. I've never been so happy to be wrong about something. If you're struggling with W-2 issues and need to speak with the IRS, this service actually delivers.
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Javier Torres
The difference might be due to certain pre-tax deductions that don't count toward Social Security but do count for Medicare and federal income tax. Common examples include: 1. Health insurance premiums 2. Flexible spending accounts (FSA) 3. Some retirement contributions 4. Transportation benefit programs Check your final pay stub from 2018 and see if you had any significant pre-tax deductions that might explain the difference. Also, did you work for a school system or government agency? Some government employees have different Social Security withholding rules.
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Connor O'Neill
•I did have a pretty expensive health insurance plan that was coming out pre-tax, plus I was maxing out my 401k that year. Could those really account for almost $95k difference between box 1/5 and box 3 though? That seems like a massive gap!
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Javier Torres
•Health insurance premiums and 401(k) contributions typically reduce your Social Security wages, but $95k is an unusually large difference. Even if you maxed out your 401(k) at the 2018 limit ($18,500 plus any catch-up contributions if you were over 50), and had expensive health insurance (let's say $15,000-20,000 for a premium family plan), that would still only account for maybe $40,000 of the difference. If there's still a $55,000 gap unaccounted for, it's likely there was a reporting error. Another possibility is if you had some deferred compensation or special bonus arrangement that was treated differently for Social Security purposes. Either way, I would definitely contact your former employer for clarification.
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Emma Davis
I just realized my 2024 W-2 has a similar issue! Box 1 and 5 are both $87,430 but box 3 is only $52,189. I never would have noticed this if not for your post. Now I'm wondering if I'm paying the right amount of Social Security tax...
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CosmicCaptain
•Check if you contribute to a 457(b) plan. Those reduce your Social Security wages but not your Medicare wages. My wife works for the state and has this exact situation - big difference between box 3 and boxes 1/5 because of her 457(b) contributions and healthcare FSA.
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