Single-member LLC: Should I pay taxes from business or personal account?
So I just started my first single-member LLC this year and I'm trying to figure out the whole tax situation. My accountant told me I need to make quarterly estimated tax payments, but I realized I'm not sure if I should be paying these from my business checking account or just transfer the money to my personal account and pay from there? Does it actually matter which account I use to pay the IRS? The business account has more cash flow right now, but I've been treating the LLC income as pass-through and wasn't sure if there's some rule about this I don't know about. I've been keeping pretty good records of business vs personal expenses, but this tax payment thing is confusing me. Would appreciate any insight from folks who have been running a single-member LLC longer than me!
37 comments


Aaron Boston
This is a great question that a lot of new business owners have! For a single-member LLC that hasn't elected to be taxed as a corporation, the IRS treats your business as a "disregarded entity" for tax purposes. This means the business itself doesn't pay taxes - you do, personally. That said, it actually doesn't matter which account you use to make the tax payments. You can pay from either your business or personal account. The IRS doesn't care where the money comes from, just that the taxes get paid. From a practical bookkeeping perspective though, many tax professionals recommend paying from your personal account. Since a single-member LLC's income "passes through" to your personal tax return, those tax payments are technically personal obligations, not business expenses.
0 coins
Sophia Carter
•Okay but what happens if I've been paying from my business account for the last two quarters? Does that mess up my bookkeeping or create some weird audit flag? Also, if I pay from my business account does that count as me taking a draw from the business?
0 coins
Aaron Boston
•No worries if you've been paying from your business account! It doesn't create any audit flags or problems with the IRS. You're just making a payment they're expecting. From a bookkeeping perspective, yes, you should record tax payments from your business account as an owner's draw (not as a business expense). This is because paying your personal tax obligations isn't a deductible business expense - it's considered a distribution to you as the owner. Your accounting software should have a way to categorize these payments properly.
0 coins
Chloe Zhang
I dealt with this exact same confusion when I started my freelance design LLC. After getting nowhere with traditional accountants, I found taxr.ai (https://taxr.ai) and uploaded my bank statements. Their system correctly identified which of my tax payments should be classified as owner draws vs actual business expenses. The software even explained that when I make tax payments from my business account, I need to record them as "owner distributions" not as business expenses. Apparently this is super common for new small business owners to mix up. The most helpful thing was that it showed me how to properly categorize everything in QuickBooks so my profit and loss statements would be accurate.
0 coins
Brandon Parker
•Sounds interesting but can you actually use it for quarterly estimated payments too or just annual taxes? My CPA charges me $75 each time I ask a question about this stuff!
0 coins
Adriana Cohn
•I'm pretty skeptical of these tax AI tools. How does it handle state-specific LLC issues? Each state has different rules about LLCs and taxes.
0 coins
Chloe Zhang
•Yes, it actually helped me set up my quarterly payment schedule and even calculated how much I should be setting aside based on my income patterns. Was a huge relief since my income isn't consistent month to month. It does handle state-specific issues too. You tell it what state your LLC is registered in during setup, and it applies those rules. I'm in California which has that annoying $800 minimum tax, and it correctly identified that as a business expense (unlike the federal income taxes which are owner draws).
0 coins
Adriana Cohn
I was wrong about taxr.ai - just tried it and I'm honestly impressed. It immediately identified my LLC tax payments and correctly categorized the federal estimated taxes as owner distributions while keeping my state LLC fees as business expenses. My bookkeeping was a mess before and now it makes sense. I was mixing up personal and business tax types. It also explained exactly which account I should pay from for different tax types, which was way clearer than what my accountant told me.
0 coins
Jace Caspullo
After spending literal DAYS trying to reach the IRS about this exact question (and never getting through), I finally tried https://claimyr.com which got me connected to an actual IRS agent in less than 20 minutes. You can see how it works here: https://youtu.be/_kiP6q8DX5c The agent explained that for a single-member LLC, it doesn't matter which account you use to pay your taxes from the IRS perspective. What matters is how you RECORD those payments in your books. If you pay from your business account, you need to categorize it as an owner's draw, not a business expense. This saved me so much stress because I was worried I had been doing it wrong for months and would need to file amended returns or something!
0 coins
Melody Miles
•Wait how does this actually work? You pay them and they somehow get you to the front of the IRS phone queue? That sounds too good to be true with how impossible it is to reach anyone there.
0 coins
Nathaniel Mikhaylov
•Yeah right. I've been trying to talk to the IRS for 3 months. No way this actually gets you through to a real person. Sounds like a scam to me.
0 coins
Jace Caspullo
•It's not about getting to the "front" of the queue - they have a system that keeps calling the IRS with the right combination of menu options until they get through, then they call you and connect you. It's basically like having someone wait on hold for you. I was super skeptical too! I had spent multiple days trying to get through myself. But it worked exactly as advertised - I got a call back when they reached an agent, and I was connected right away. The IRS agent I spoke with was really helpful and didn't seem to care or know how I got connected.
0 coins
Nathaniel Mikhaylov
I have to eat my words and apologize for my skepticism about Claimyr. I decided to try it yesterday after continued frustration, and it actually worked! Got a call back in about 35 minutes and was connected to an IRS rep who answered all my LLC tax payment questions. They confirmed that there's no rule about which account you use to pay, but explained how to properly record the payments for tax purposes. Definitely worth it for the time saved and peace of mind.
0 coins
Eva St. Cyr
One thing nobody's mentioned yet is that paying from your business account creates a clearer paper trail for the business portion of your self-employment taxes. My tax guy actually recommended I pay from the business account and just mark it as an owner draw in QuickBooks. He said it's easier to trace back if you ever get audited since there's a direct connection between your business income and the tax payments.
0 coins
Kristian Bishop
•But wouldn't that mean you're paying taxes on money that never actually went into your personal account? Does the IRS expect you to report all business income on your personal taxes even if you didn't transfer it to your personal account?
0 coins
Eva St. Cyr
•Whether you transfer the money to your personal account or not doesn't matter for tax purposes. With a single-member LLC (unless you've elected to be taxed as a corporation), ALL business income is considered your personal income in the year it's earned, regardless of whether you transfer it to your personal account. That's what "pass-through taxation" means - the business entity is disregarded, and all profits pass through to your personal tax return. So you're paying taxes on the business profits, not on the transfers between accounts.
0 coins
Kaitlyn Otto
When I first started my LLC, I was mixing up estimated tax payments (which are for income tax) with self-employment tax and it was causing me major confusion about which account to pay from!
0 coins
Axel Far
•I think a lot of people struggle with this. For others who are confused: both income tax AND self-employment tax for a single-member LLC are reported on your personal tax return (Schedule C and Schedule SE). So both are technically personal tax obligations.
0 coins
Gianna Scott
As someone who went through this same confusion last year, I can confirm what others have said - it really doesn't matter which account you use to make the payments from an IRS perspective. However, I learned the hard way that consistency in your bookkeeping is key. I started paying from my business account, then switched to personal, then back to business, and it made my year-end bookkeeping a nightmare. My advice would be to pick one method and stick with it. If you pay from your business account, just make sure you're recording those payments as owner distributions/draws, not business expenses. Also, don't forget that your quarterly payments should include both your income tax AND self-employment tax estimates. I made the mistake my first year of only calculating based on income tax and got hit with a big self-employment tax bill at year-end. The self-employment tax is about 15.3% on your net business income, so factor that into your quarterly payment calculations.
0 coins
Ryan Andre
•This is such helpful advice about staying consistent! I'm just starting out with my LLC and was going back and forth on this exact issue. Quick question - when you say the self-employment tax is about 15.3%, is that on top of regular income tax or does it replace part of it? I want to make sure I'm setting aside enough money for quarterly payments and not getting surprised like you did.
0 coins
Isabella Costa
•The 15.3% self-employment tax is IN ADDITION to your regular income tax, not instead of it! So you'll pay both. The self-employment tax covers Social Security (12.4%) and Medicare (2.9%) taxes that would normally be split between you and an employer if you were a W-2 employee. Here's a rough breakdown: if your LLC nets $50,000, you'd owe about $7,650 in self-employment tax PLUS whatever your income tax rate is on that $50k. So if you're in the 22% tax bracket, you'd owe roughly $11,000 in income tax + $7,650 in SE tax = $18,650 total. One small silver lining - you can deduct half of the self-employment tax (about 7.65%) when calculating your income tax, which reduces the income tax portion slightly. But definitely plan for both taxes when setting aside money for quarterlies!
0 coins
Luca Ferrari
Great question! I went through this exact same confusion when I started my single-member LLC two years ago. The good news is that from the IRS's perspective, it truly doesn't matter which account you use to make your tax payments - they just care that the payments are made on time. However, I'd recommend being strategic about your choice for bookkeeping purposes. I personally pay from my business account because it keeps all my tax-related transactions in one place, making it easier to track for quarterly planning. Just make sure you categorize these payments correctly as owner draws/distributions, not business expenses. One tip that really helped me: set up a separate savings account within your business banking specifically for tax payments. I automatically transfer a percentage of each payment I receive into this "tax account" so the money is already set aside when quarterly payments are due. This way you're not scrambling to find the cash or disrupting your business cash flow when tax time comes around. Also, don't forget to include both income tax AND self-employment tax in your quarterly calculations - that self-employment tax portion caught me off guard my first year!
0 coins
Dylan Wright
•That's really smart advice about setting up a separate tax savings account within your business banking! I'm just getting started with my LLC and was wondering - what percentage do you typically set aside? I've heard everything from 25% to 35% and I'm not sure what's realistic for someone just starting out. Also, do you transfer the money immediately when you get paid by clients, or do you wait until the end of each month to calculate and transfer?
0 coins
Miranda Singer
•Great question! I typically set aside 30% of each payment I receive, which covers both income tax and self-employment tax with a small buffer. When I was starting out, I erred on the side of setting aside too much rather than too little - better to have a refund than owe money! I transfer the money immediately when I get paid by clients. I have my business checking set up so that as soon as a payment comes in, I automatically move 30% to my tax savings account. This way I never see that money as "available" for business expenses and I'm not tempted to spend it. The percentage you need really depends on your tax bracket, but 30% is a safe starting point for most people. You can always adjust it after your first year when you have a better sense of your actual tax liability. The key is building the habit of setting it aside immediately - trust me, it's much easier than trying to come up with thousands of dollars all at once when quarterly payments are due!
0 coins
Andre Moreau
This thread has been super helpful! I'm in a similar situation with my first single-member LLC and was totally confused about the account issue. Based on what everyone's shared, it sounds like the key takeaways are: 1. IRS doesn't care which account you pay from - business or personal both work 2. If you pay from business account, record it as owner draw/distribution (NOT a business expense) 3. Stay consistent with whichever method you choose for easier bookkeeping 4. Don't forget to include self-employment tax (15.3%) in your quarterly calculations, not just income tax The advice about setting up a separate tax savings account within business banking and automatically transferring 30% of each payment sounds like a game-changer. I've been manually trying to calculate and set aside money each month and it's been stressful. One follow-up question for the group - for those who pay from their business account, do you make separate payments for federal and state taxes, or can you lump them together as one owner draw entry in your bookkeeping?
0 coins
Noah Torres
•Great summary of all the key points! For your bookkeeping question, I treat federal and state tax payments as separate owner draw entries even though they might go out on the same day. This makes it much easier at year-end when I need to track how much I paid to each jurisdiction for tax prep purposes. In QuickBooks, I'll create two separate transactions: one coded as "Owner Draw - Federal Taxes" and another as "Owner Draw - State Taxes" with the respective amounts. Some people lump them together, but separating them has saved me time during tax season when my accountant needs those breakdowns. Plus if you ever need to reference how much you paid in state taxes for other purposes (like if you move states mid-year), having it separated makes that much easier. The automatic 30% transfer approach really is a game-changer - I wish I had started doing that from day one instead of the manual stress-inducing method!
0 coins
Ev Luca
This is exactly the kind of practical advice new LLC owners need! I just formed my single-member LLC last month and have been paralyzed by this same question. Reading through everyone's experiences has been incredibly reassuring. I love the idea of the automatic 30% transfer to a separate tax account - that takes all the guesswork and willpower out of the equation. I've been manually trying to calculate what to set aside each month and it's been keeping me up at night wondering if I'm doing it right. One thing I'm still unclear on though - when you all mention "self-employment tax," does this apply even if I'm still working a regular W-2 job part-time while building up the LLC? I'm not sure if having some W-2 income changes how the self-employment tax calculation works for the LLC income portion. Also, has anyone dealt with estimated tax penalties? I'm worried that since I just started the LLC in January, my quarterly payments for Q1 might not have been enough since I was still figuring out my income projections.
0 coins
Elijah Knight
•Great questions! Yes, self-employment tax still applies to your LLC income even if you have W-2 income from another job. The LLC income gets reported on Schedule C of your personal tax return, and you'll pay self-employment tax on that net business income regardless of your other income sources. However, having W-2 income can actually help with your estimated tax situation! If you're having enough withheld from your W-2 job to cover at least 90% of this year's total tax liability (or 100% of last year's if you made over $150k), you generally won't face underpayment penalties even if your quarterly estimates for the LLC income are low. For the estimated tax penalties, don't stress too much about Q1 since you just started in January. The penalty is calculated separately for each quarter, and it's usually not huge unless you're significantly underpaying. You can always adjust your remaining quarterly payments upward to compensate. The IRS also has a "safe harbor" rule - if your total estimated payments for the year equal at least 100% of last year's tax liability, you won't owe penalties regardless of how much you actually owe this year.
0 coins
Natalie Wang
This thread is a goldmine of information! I'm starting my first single-member LLC next month and this conversation has answered so many questions I didn't even know I had yet. The automatic 30% transfer strategy sounds brilliant - I'm definitely setting that up from day one. It seems like the consensus is that paying from the business account and recording as owner draws is the cleanest approach for record-keeping. One quick question for those who've been doing this longer: do you recommend setting up the tax savings account at the same bank as your business checking, or is it better to put it somewhere separate (maybe even a high-yield savings account) so it earns a bit of interest while sitting there? I figure if I'm setting aside 30% of every payment, that money could be sitting there for months before quarterly payments are due. Also, has anyone used estimated tax payment vouchers vs. paying online through EFTPS? I'm trying to figure out the most efficient way to actually make the payments when the time comes.
0 coins
GalaxyGuardian
•Welcome to the LLC world! You're asking all the right questions before you even start - that's going to save you so much headache down the road. For the tax savings account, I'd actually recommend keeping it at the same bank as your business checking for simplicity, especially when you're just starting out. Yes, you could earn a bit more interest in a high-yield account, but the convenience of instant transfers and having everything in one place for bookkeeping usually outweighs the extra few dollars in interest. Plus, many business banking platforms let you set up automatic transfers between accounts, which makes that 30% transfer completely seamless. For making the actual payments, I've found EFTPS (Electronic Federal Tax Payment System) to be the way to go. It's free, you can schedule payments in advance, and it gives you immediate confirmation that your payment went through. The paper vouchers work fine too, but online is just more convenient and you get better tracking. You can also make payments directly through the IRS website, but EFTPS gives you more control over timing and better record-keeping features. One tip: set up your EFTPS account as soon as you get your EIN - it takes a few days to get activated, so don't wait until you need to make your first payment!
0 coins
Zoe Papanikolaou
As someone who's been running a single-member LLC for about 3 years now, I can definitely relate to this confusion! The good news is you're overthinking it - the IRS truly doesn't care which account you use to make tax payments. I personally pay from my business account and record it as an owner's draw in my bookkeeping. This approach has worked well for me because it keeps all my tax-related transactions tied to the business income that generated the tax liability in the first place. One mistake I made early on was not realizing that quarterly estimated payments need to cover BOTH income tax AND self-employment tax (that 15.3% really adds up!). I'd suggest using the IRS Form 1040ES worksheet to calculate your quarterly payments properly - it walks you through both components. Also, since you mentioned your accountant told you about quarterly payments, make sure you're clear on the deadlines: Q1 is due April 15, Q2 is June 15, Q3 is September 15, and Q4 is January 15 of the following year. Missing these can result in penalties even if you get a refund when you file your annual return. The fact that you're keeping good records of business vs personal expenses puts you way ahead of where I was when I started!
0 coins
Rita Jacobs
•Thank you for sharing your experience! I'm just getting started with my LLC and the quarterly payment deadlines are something I definitely need to get on my calendar. Quick question about Form 1040ES - do you recalculate your quarterly payments each quarter based on actual income, or do you estimate once at the beginning of the year and stick with those amounts? My income is pretty variable month to month, so I'm not sure if I should be adjusting each quarter or if that makes things more complicated for bookkeeping purposes. Also, when you say you record tax payments as owner's draws, do you use a specific account/category in your bookkeeping software, or just lump all owner draws together? I want to make sure I'm setting up my chart of accounts correctly from the start.
0 coins
Grace Johnson
•Great question about recalculating quarterly payments! I personally recalculate each quarter based on actual income trends, especially since you mentioned your income is variable. It's totally fine to adjust - the IRS expects this for businesses with fluctuating income. What I do is look at my year-to-date profit every quarter and project forward, then adjust my payment accordingly. If I underpaid in an earlier quarter, I just add the difference to the next quarter's payment. The key is making sure your total payments for the year meet the safe harbor rules (100% of last year's tax or 90% of current year's). For bookkeeping, I use a specific account called "Owner Draw - Tax Payments" separate from other draws like personal expenses or salary draws. This makes it super easy at year-end to total up exactly how much I paid in taxes, which my accountant loves. In QuickBooks, I actually break it down further into "Owner Draw - Federal Taxes" and "Owner Draw - State Taxes" so I can track each separately. The variable income thing gets easier to manage once you have a year of data to work with. Don't stress too much about getting it perfect in year one!
0 coins
Hugh Intensity
As a new single-member LLC owner myself, this discussion has been incredibly valuable! I've been stressing about this exact same issue for weeks. Based on everything shared here, I'm feeling much more confident about my approach. I'm planning to follow the consensus advice: pay from my business account, record as owner draws (not business expenses), and set up that automatic 30% transfer system that several people mentioned. The idea of having a dedicated tax savings account within my business banking sounds like it will eliminate so much of the quarterly payment anxiety I've been having. One thing that really stood out to me was the reminder about self-employment tax being IN ADDITION to regular income tax - I had been calculating wrong and probably would have been short on my payments. The 15.3% SE tax plus whatever income tax bracket you're in really adds up quickly! For other newcomers reading this: the key takeaway seems to be that the IRS doesn't care which account you use, but consistency in your bookkeeping method is crucial. Pick one approach and stick with it. And definitely don't forget to factor in both income tax AND self-employment tax when calculating your quarterly payments. Thanks to everyone who shared their real-world experiences - this is exactly the kind of practical guidance that's hard to find elsewhere!
0 coins
Demi Hall
•This whole thread has been such a lifesaver! I'm literally in the exact same boat - just started my single-member LLC a few months ago and have been losing sleep over whether I'm handling the tax payments correctly. The consensus here about paying from the business account and recording as owner draws makes so much sense, and I love how everyone emphasized the importance of including that self-employment tax in calculations. I was definitely underestimating how much I needed to set aside. One small addition for other newcomers: I found it helpful to also set up a separate subfolder in my filing system specifically for quarterly tax payment confirmations and records. Since we're treating these as owner draws rather than business expenses, having clear documentation of when and how much we paid becomes even more important for personal tax filing purposes. The automatic 30% transfer strategy is brilliant - I'm setting that up this week! Thanks everyone for sharing your real experiences instead of just generic advice.
0 coins
Kevin Bell
This has been such a helpful thread for new LLC owners! I'm in my second year of running a single-member LLC and I wish I had found this kind of practical advice when I was starting out. One thing I'd add based on my experience: if you do decide to pay from your business account (which I recommend for the paper trail reasons others mentioned), make sure you're consistent about the timing of recording the owner draw transaction. I learned to record it on the same day I make the payment, not when I initiate the transfer or when it clears. This keeps everything aligned for monthly financial statements. Also, for anyone using QuickBooks - there's actually a specific "Owner's Draw" account type that's separate from regular expense accounts. Using this makes it crystal clear that these payments aren't deductible business expenses, which will save you headaches during tax prep. The 30% automatic transfer strategy really is game-changing. I started doing something similar after my first year and it's eliminated all the stress around quarterly payments. Now I never have to scramble to find the money when deadlines approach!
0 coins
Amina Diallo
•This is such great advice about the timing of recording transactions! I'm brand new to this whole LLC thing and haven't even made my first quarterly payment yet, but I can already see how important it's going to be to stay organized from the beginning. Your point about using the specific "Owner's Draw" account type in QuickBooks is really helpful - I was just going to create a generic expense category but now I understand why that would be wrong. It sounds like getting the bookkeeping structure right from day one will save a lot of headaches later. I'm definitely convinced about setting up that automatic 30% transfer system after reading everyone's experiences here. Did you notice any difference in your stress levels around tax time once you started doing the automatic transfers? I'm hoping it will help me sleep better knowing the money is already set aside!
0 coins