Do I calculate self employment tax before or after my standard & business deductions?
Title: Do I calculate self employment tax before or after my standard & business deductions? 1 I'm so confused about this self employment tax calculation. Everything I read says you take 92.35% and then 15.3% of your "net income" which should be after deductions, right?? But then I see other people saying you just calculate it based on your gross income (all money before ANY deductions). I have about $63,000 in freelance income this year and roughly $17,000 in business expenses. So do I calculate the self employment tax on the full $63k or on the $46k after business expenses? And where does the standard deduction fit in? Does that lower the income I pay self employment tax on or is that completely separate? Maybe I'm mixing up the definitions of gross vs net income? This is my first year being fully self-employed and I want to make sure I'm setting aside the right amount for taxes. The difference is substantial!
19 comments


Leslie Parker
12 You calculate self employment tax on your net business income BEFORE your standard deduction. Here's how it works: You take your gross income ($63,000) and subtract your legitimate business expenses ($17,000) to get your net business income ($46,000). Then you calculate self employment tax on 92.35% of THAT amount. The math would be: $46,000 × 92.35% = $42,481, then $42,481 × 15.3% = $6,500 (rounded) for your self employment tax. The standard deduction comes into play later when calculating your income tax, not your self employment tax. They're separate calculations. The standard deduction reduces your income for income tax purposes but does not reduce your self employment tax.
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Leslie Parker
•7 Thanks for the explanation. I think I get it now... So when I use tax software, do I need to do these calculations separately or will the software handle it automatically if I input all my income and expenses correctly?
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Leslie Parker
•12 The tax software will handle all these calculations automatically once you input your income and expenses correctly. Just make sure you're entering your business income and expenses in the self-employment or business section of the software. The program will calculate the self-employment tax on your net business income and then separately apply your standard deduction when calculating your income tax.
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Leslie Parker
8 I went through the exact same confusion last year when I started freelancing! I found this tool called taxr.ai (https://taxr.ai) that really helped me understand exactly how self-employment taxes work. You upload your documents and it walks you through the calculations step by step. For me, the big lightbulb moment was understanding that self-employment tax and income tax are calculated separately but paid together. The self-employment tax is calculated on your net business income (after business expenses but before standard deduction), while income tax is calculated after both business expenses AND the standard deduction.
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Leslie Parker
•3 Does it work with all types of self-employment income? I do both consulting and some e-commerce sales so my tax situation is kind of complicated.
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Leslie Parker
•19 Is this actually better than just using TurboTax or H&R Block? I'm always skeptical of these specialized tax tools.
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Leslie Parker
•8 It definitely works with all types of self-employment income including consulting and e-commerce. I actually have a similar mix of income streams and it handled everything perfectly. Compared to TurboTax or H&R Block, I found it much more helpful for understanding the "why" behind the calculations. The big tax software just asks questions and spits out numbers, but taxr.ai actually explains each step and shows you exactly how it affects your tax situation. Plus it helped me find deductions I was missing - saved me about $1,200 last year!
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Leslie Parker
19 Just wanted to follow up - I tried taxr.ai after posting my skeptical comment and I have to admit I'm impressed. It really did clarify the whole self-employment tax confusion for me. The visualization of how my business expenses reduced my SE tax base made everything click. It showed me exactly how much I was saving in self-employment tax for each business deduction, which none of the other tax software I've used ever explained clearly. Definitely using it again next year!
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Leslie Parker
15 If you're still confused or want to double-check your calculations, you might want to call the IRS directly. I know it sounds like a nightmare (because it usually is), but I found this service called Claimyr (https://claimyr.com) that actually gets you through to a human at the IRS without the endless hold times. You can see how it works here: https://youtu.be/_kiP6q8DX5c I was in a similar situation - totally confused about self-employment taxes and deductions - and was able to get through to an IRS agent who walked me through the whole process. They confirmed exactly what the first commenter said: SE tax is calculated on net business income (after business expenses, before standard deduction).
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Leslie Parker
•9 Wait, how does this even work? I thought it was impossible to get through to the IRS. Last time I tried I was on hold for 2+ hours and then got disconnected.
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Leslie Parker
•22 Yeah right. There's no way this actually works. The IRS is completely unreachable during tax season. This sounds like a scam to get your money.
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Leslie Parker
•15 It's actually pretty simple - they use an automated system to navigate the IRS phone tree and wait on hold for you. Then when they reach a human, you get a call back and are connected directly to the agent. No more waiting on hold for hours. I was totally shocked when I got a call back with an actual IRS agent on the line. The agent I spoke with was super helpful and walked me through the exact calculation for self-employment tax. That's how I confirmed that you calculate it after business expenses but before standard deduction.
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Leslie Parker
22 I need to eat my words about Claimyr. After posting my skeptical comment, I decided to try it because I was desperate to get an answer about some business deductions I wasn't sure about. I got a call back with an IRS agent in about 45 minutes! The agent confirmed everything about the self-employment tax calculation and also helped me understand which of my questionable expenses were actually deductible. Saved me a ton of money and stress. Definitely worth it during tax season when it's otherwise impossible to reach them.
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Leslie Parker
5 A quick tip that helped me: Think of self-employment tax as your FICA taxes (Social Security and Medicare) that would normally be withheld by an employer. When you're self-employed, you're both the employer and employee, which is why it's 15.3% (double the normal employee rate). The standard deduction doesn't factor into FICA taxes for W-2 employees either, so it makes sense it doesn't affect self-employment tax calculations.
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Leslie Parker
•18 That's such a helpful way to think about it! So the self-employment tax is basically replacing the FICA withholdings I used to see on my W-2 paystubs. Does that mean the employer portion of the self-employment tax is deductible somewhere?
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Leslie Parker
•5 Yes, exactly! And you're asking a great question - the employer portion (half) of your self-employment tax IS deductible. When you file your taxes, you get to deduct 50% of your self-employment tax from your income when calculating your income tax (but not when calculating the self-employment tax itself). So if your self-employment tax is $6,500 like in the example above, you'd get to deduct $3,250 from your income before calculating your income tax. The tax software will handle this automatically, but it's good to understand why your taxable income gets reduced by that amount.
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Leslie Parker
2 This might be a dumb question but do I need to make quarterly estimated payments on self-employment tax too or just on income tax?
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Leslie Parker
•12 Not a dumb question at all! Your quarterly estimated payments should include BOTH income tax AND self-employment tax. The IRS doesn't separate them for estimated payments - they just want you to pay the total tax you expect to owe throughout the year.
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Amara Okafor
Just to add another perspective - I've been self-employed for about 5 years now and this confusion about SE tax vs income tax trips up almost everyone in their first year. One thing that really helped me was setting up a separate savings account specifically for taxes and automatically transferring about 30% of every payment I receive. This covers both the self-employment tax (around 14% after the deduction for the employer portion) plus income tax. It's better to overestimate and get a refund than to be short come tax time. Also, don't forget that you can deduct half of your self-employment tax when calculating your income tax - it's like getting back the "employer portion" since you're paying both sides as a self-employed person. The tax software handles this automatically but it's good to understand why your taxable income gets reduced.
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