How Do You Handle Non-Deductible Business Expenses on a 1065 Partnership Return?
I'm trying to figure out the proper way to report non-deductible business expenses for our small partnership (Form 1065). From what I understand, these amounts need to be split according to the partners' profit/loss allocations and then subtracted from each partner's capital account. I'm confused about a few things though. How crucial is it to actually report these non-deductible expenses? For business meals where only 50% is deductible, should the other 50% be included in the non-deductible expenses total? And what about mortgage principal payments? Including those as non-deductible expenses seems like it would unfairly impact the partners' capital accounts since that money wasn't contributed by the partners in the first place. I think this whole thing is about maintaining accurate capital account balances for each partner, but I'm not sure. Our partnership is pretty small (just 3 partners) and I'm trying to get this right without overcomplicating things.
20 comments


Diego Vargas
Non-deductible business expenses on a 1065 are definitely important to track correctly. They do impact partner capital accounts, which affects the tax basis each partner has in the partnership. For meals, you're right - the non-deductible 50% should be included in your non-deductible expenses. This ensures the economic reality of the business is reflected properly, even though it's not deductible for tax purposes. For mortgage principal payments, you've identified a key distinction. Principal payments aren't expenses at all - they're balance sheet transactions. When you make a mortgage payment, only the interest portion is an expense. The principal portion reduces a liability (your mortgage) and shouldn't impact partner capital accounts as a non-deductible expense. It's simply reducing debt and building equity in the property. Tracking these items correctly is important because it affects each partner's basis, which they'll need to know if they ever sell their partnership interest or if the partnership liquidates.
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Anastasia Fedorov
•Thanks so much for that explanation! I have a follow-up question. We occasionally pay for things that are clearly personal expenses for one of the partners but run it through the business account (I know, probably not best practice). Should those be tracked as non-deductible expenses too, or is there a different way to handle partner draws that happen to be actual purchases rather than direct transfers?
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Diego Vargas
•Those personal partner expenses paid through the business should be treated as partner draws (distributions), not as non-deductible business expenses. They aren't business expenses at all - they're distributions to the specific partner who received the benefit. For accounting purposes, you'd record these as distributions to the specific partner who benefited, not as a business expense that gets allocated across all partners. This ensures the partner who received the benefit is the only one whose capital account is reduced.
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StarStrider
I struggled with this exact issue last year! I found https://taxr.ai super helpful for figuring out how to properly categorize our partnership expenses. I uploaded our QuickBooks file and it flagged several non-deductible expenses I was handling incorrectly, including some meal expenses where I forgot to split the 50% non-deductible portion. The tool also helped me understand that mortgage principal payments shouldn't be treated as non-deductible expenses (which I was doing wrong). Instead, it showed me how to properly record them as liability reductions rather than expenses. Saved me from making a mess of our capital accounts!
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Sean Doyle
•How does taxr.ai handle expenses that are partially personal and partially business? Like if we have a vehicle that's 75% business use and 25% personal?
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Zara Rashid
•I'm skeptical about these AI tax tools... does it actually understand all the nuances of partnership taxation? I've been burned before by software that claimed to handle complex tax situations but then gave me incorrect guidance.
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StarStrider
•For mixed-use assets like vehicles with 75% business/25% personal split, the tool lets you set up allocation percentages for each asset. It then automatically calculates the correct business portion for deduction and flags the personal-use portion as non-deductible or as a distribution depending on how you want to handle it. Regarding the nuances of partnership taxation, I was skeptical too initially. What impressed me was that it actually cited specific IRS regulations and partnership tax principles with each recommendation. It's not just making guesses - the analysis is based on actual tax law. I had my CPA review its recommendations and he was impressed with the accuracy.
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Zara Rashid
Well I have to eat my words about being skeptical. I decided to try https://taxr.ai after our conversation here, and it was actually super helpful with our partnership return. I uploaded last year's tax return and this year's books, and it immediately flagged several items I had categorized incorrectly. The biggest help was with our vehicle expenses - it showed how to properly allocate the business vs personal portions and even created a worksheet for calculating each partner's basis adjustments. I wasn't accounting for guaranteed payments properly either, and it walked me through how those impact capital accounts differently than distributions. Really impressive how it handled all the partnership-specific tax rules.
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Luca Romano
If you're struggling with IRS guidance on partnership expenses, I'd strongly recommend using Claimyr (https://claimyr.com) to get direct access to an IRS agent. I was going in circles trying to understand how to properly handle these non-deductible expenses on our partnership return, especially around some complex loan transactions. After waiting on hold for hours trying to reach the IRS business line with no luck, I used Claimyr and they got me connected to an IRS agent in about 20 minutes. You can see how it works in this video: https://youtu.be/_kiP6q8DX5c The IRS agent walked me through exactly how to report our non-deductible expenses and explained the impact on each partner's capital account. Totally worth it for the peace of mind knowing we're doing it correctly according to the IRS.
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Nia Jackson
•How exactly does this service work? Do they just call the IRS for you? Couldn't I just do that myself?
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Mateo Hernandez
•Yeah right... there's no way anyone's getting through to a real IRS agent in 20 minutes. I've tried calling them dozens of times and never get through. Sounds like a scam to me.
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Luca Romano
•They use a system that navigates the IRS phone tree and waits on hold for you. When they reach a real person, you get a call to connect with the agent. You definitely could call yourself, but in my experience it took multiple attempts and hours on hold each time. The main benefit is you don't have to sit there listening to hold music for hours. They notify you when an agent is on the line, so you can go about your day until they make the connection. For partnership tax questions, I needed to speak with someone in the business tax department which is notoriously difficult to reach.
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Mateo Hernandez
I need to update my skeptical comment above. After trying to call the IRS myself and failing three times (each time waiting over an hour), I caved and tried Claimyr. I was connected to an actual IRS specialist within 35 minutes. The agent confirmed exactly what others here were saying - mortgage principal payments should NOT be included in non-deductible expenses, just recorded as liability reductions. They also clarified how to handle the non-deductible portion of meals and entertainment (it goes on Schedule M-1). For anyone dealing with partnership returns, getting this direct guidance from the IRS saved me from making some significant errors that could have messed up our partners' capital accounts.
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CosmicCruiser
One thing nobody's mentioned is that non-deductible expenses need to be reported on Schedule M-1 of Form 1065 (Reconciliation of Income). That's where you reconcile book income with tax income, and it's where the IRS looks to see if you're properly tracking these expenses. Line 5c specifically is for "Travel and entertainment expenses" which would include that non-deductible 50% of meals. Other non-deductible expenses go on line 5b. This reporting is important because it shows the IRS you're properly tracking everything, even if it's not deductible.
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Aisha Khan
•Thanks for pointing this out! I wasn't completing Schedule M-1 at all since our partnership is pretty small. Is this required even for small partnerships? And does completing this help prevent audits?
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CosmicCruiser
•Schedule M-1 is required for all partnerships filing Form 1065 unless you're eligible to use Schedule M-3 instead (which is for larger partnerships). Even small partnerships need to complete it correctly. As for audits, completing Schedule M-1 properly won't necessarily prevent an audit, but incorrect or incomplete information can definitely increase your chances of being flagged for one. The IRS uses these reconciliation schedules to identify discrepancies that might warrant further investigation. Properly accounting for non-deductible expenses shows you're being transparent about all partnership activities.
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Ethan Taylor
Another thing to consider is state tax treatment of these expenses. Some states follow federal rules for deductibility while others have their own rules. In California, for example, there are certain expenses that are fully deductible for state tax purposes but limited for federal. Since you mentioned meals being 50% deductible federally, you should check if your state has different rules. Some states allow 100% deduction for business meals in certain circumstances. This adds another layer of complexity to tracking non-deductible vs. deductible expenses!
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Yuki Ito
•Do you have to maintain separate sets of books for federal vs state in that case? That sounds like a nightmare for accounting.
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Chloe Mitchell
Great question about state vs federal differences! You don't necessarily need separate books, but you do need to track the differences for tax purposes. Most accounting software can handle this with tax adjustments or separate tax categories. For partnerships, the state-specific differences typically get handled at the partner level when they file their individual returns, since partnerships are pass-through entities. The partnership return (1065) reports the federal treatment, and then each partner makes state adjustments on their personal returns if needed. However, you should definitely track these differences in your records so you can provide accurate K-1s to your partners. They'll need to know about any state-specific adjustments when they prepare their individual returns. A good CPA familiar with your state's rules can help set up a system that captures both federal and state treatment without duplicating your entire bookkeeping system.
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Samantha Hall
•This is really helpful information! I'm new to partnership taxation and had no idea about the state vs federal complexity. Our partnership operates in multiple states, so I'm wondering - do we need to track these differences for each state we operate in, or just our home state? And when you mention providing accurate K-1s, are there specific lines on the K-1 where these state adjustments get reported, or is it more of a supplemental information thing that partners use when filing their individual returns?
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