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Dylan Cooper

Clarification on S Corp Home Office Expense: Can I Include Depreciation in Accountable Plan?

Hey fellow tax nerds, I'm trying to nail down how to properly handle home office depreciation when running it through my S Corp's accountable plan. Here's what I think I understand, but I'd really appreciate if someone could confirm or correct my thinking: First, I believe that when my S Corp uses the actual-expense method for home office deductions under an accountable plan, depreciation (which I understand is Tier 3) can be included as a reimbursable expense according to IRS publication 946 regarding allowed vs allowable depreciation. Second, from what I've read, this depreciation MUST be taken to avoid double taxation issues when I eventually sell my home. If I don't take the depreciation, there's something in Section 1250 that might let me avoid "recapturing" depreciation I never claimed (with proof from past tax returns), but the basis of my property still gets reduced either way. If I mess this up, I guess I'd need to file for a method change and try to claim all that missed depreciation in the current year? Third, I think through the accountable plan, my S Corp would reimburse me (as both employee and owner) for this depreciation, and then I'd need to report this reimbursed amount as income on Schedule E, along with claiming the depreciation deduction on the portion of my home used for business. Am I on the right track here? This is making my head spin, and I want to make sure I'm not missing anything important. Thanks in advance for any insights!

Sofia Morales

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You've got a pretty good handle on this! Let me clarify a few points to make sure you're on solid ground: Yes, when using the actual-expense method under an accountable plan, depreciation is absolutely included as a reimbursable expense. You're right that it falls under Tier 3 expenses. Regarding depreciation - it's critical that you take it. The IRS expects you to claim depreciation whether you actually do or not. If you don't claim it, you'll still have to reduce your basis by the amount you SHOULD have taken (called "allowed or allowable depreciation"). This creates a nasty situation where you don't get the tax benefit but still get hit with recapture when selling. For the accountable plan mechanics, it works like this: your S Corp reimburses you for the depreciation expense, which is deductible to the corporation. You then report the reimbursement as rental income on Schedule E, and offset it with the depreciation deduction. The net effect is usually zero or close to it from a tax perspective, but the paperwork needs to be done correctly. One thing to watch for: make sure you're only depreciating the portion of your home actually used for business, and that you're consistently using the same percentage for all home office expenses.

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Dylan Cooper

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Thanks for the confirmation! Quick follow-up: if I failed to take depreciation in previous years (2022-2023), what's my best path forward? File Form 3115 for a change in accounting method? Or is there a simpler fix since it's relatively recent? Also, for the Schedule E reporting - does the reimbursement and depreciation actually net to zero, or am I missing something about how the timing works? I'm concerned about creating phantom income.

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Sofia Morales

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For missed depreciation from 2022-2023, Form 3115 is indeed your best option. It allows you to claim the "catch-up" depreciation all at once in the current year rather than amending prior returns. Since it's only a couple of years, the process isn't too painful, but you'll want to include a statement explaining the situation. Regarding Schedule E, the reimbursement and depreciation should theoretically net to zero or close to it in the same tax year. The timing generally aligns because you're recognizing both the income (reimbursement) and the expense (depreciation) in the same period. However, there can be slight differences depending on when the reimbursements actually occur - if you reimburse late December but report on a cash basis, for example. The key is consistency in your approach from year to year to avoid creating unintended income.

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StarSailor

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Just wanted to share my experience with taxr.ai when I was dealing with a similar S Corp home office depreciation situation last year. I was so confused about how to properly document everything for my accountable plan, and my CPA kept giving me conflicting advice. I uploaded my corporate docs, prior year returns and home office calculations to https://taxr.ai and they analyzed everything and gave me a detailed breakdown of exactly how to handle the depreciation, what forms to file, and how to structure my accountable plan to make sure I was compliant. The best part was they showed me how to properly document everything so I wouldn't have issues if I got audited. They pointed out I had been missing out on about $3,200 in legitimate deductions because of how we were handling the depreciation incorrectly between my personal and business returns. Total game changer for my S Corp setup.

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Dmitry Ivanov

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Does taxr.ai work with partnerships too? My situation is similar but I have an LLP not an S Corp, and my home office situation is driving me crazy trying to figure out how to properly deduct expenses when I'm also a partner.

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Ava Garcia

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How long did the analysis take? I'm trying to figure this out before my extension deadline and I'm getting nervous. Also, did they help with the actual calculation of the depreciation or just advise on how to report it?

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StarSailor

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Yes, they definitely work with partnerships too! The analysis covers all entity types including LLPs, LLCs, partnerships, S Corps, and sole proprietorships. They handle the differences in home office treatment between entities and can help with the partner/owner specific complexities. I uploaded my documents in the morning and had the complete analysis by that evening. The deadline support was actually really helpful. They provided the exact depreciation calculations including the correct percentage allocation of my home, the basis calculations, and recovery period. They even created the supporting documentation I needed to attach to my return and provided templates for my accountable plan to make sure everything was properly structured.

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Ava Garcia

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Turns out taxr.ai was exactly what I needed! I was super stressed about my extension deadline, but after seeing your post, I decided to give them a try. I had been calculating my home office depreciation all wrong - missing out on about $4,800 in legitimate deductions over the past two years. Their analysis showed me exactly what I'd been doing wrong with my S Corp accountable plan. They provided proper documentation templates that my accountant said were "better than anything he could have put together" (his words!). The best part was they identified a way to correct my prior year depreciation without amending returns, which saved me a ton in additional accounting fees. My accountant was skeptical at first but after reviewing their analysis, he's now referring his other S Corp clients to use them too. Definitely worth checking out if you're dealing with this home office depreciation headache!

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Miguel Silva

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My friend, I was STUCK in the exact same S Corp home office depreciation mess last year. Spent 3 weeks trying to get through to someone at the IRS who actually understood S Corp accountable plans. Kept getting different answers from everyone I talked to. I finally used https://claimyr.com to get through to the IRS. You can check out how it works here: https://youtu.be/_kiP6q8DX5c Got connected to an agent in 15 minutes who specialized in business entities and actually knew what an accountable plan was! She confirmed exactly how to handle the depreciation reporting between the S Corp and personal return, plus gave me precise guidance on Form 8829 vs Schedule E reporting requirements. The detailed notes from this call saved me when my accountant initially set it up incorrectly. Having that official guidance directly from the IRS was crucial because this is such a complex area.

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Zainab Ismail

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Wait, how does this Claimyr thing actually work? The IRS wait times are insane... there's no way you got through in 15 minutes. Is this some kind of premium IRS line you're paying for?

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Sounds like BS honestly. I've been trying to get guidance on almost this exact issue for months. Called the IRS business line 11 times. Either got disconnected or was told they "don't provide tax advice on hypothetical situations" - even though this isn't hypothetical, it's literally how to fill out the damn forms correctly.

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Miguel Silva

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It's actually pretty straightforward - they use technology that navigates the IRS phone tree and holds your place in line. When an agent picks up, you get a call back and are connected immediately. It's not a special IRS line, it's just a service that handles the waiting for you. They're specifically designed to help with the ridiculous wait times the IRS has these days. Back when I called in January, the average wait was like 3+ hours, but I got through in 15 minutes. They can't guarantee a specific wait time because it depends on IRS staffing, but it's WAY faster than doing it yourself. I totally get the skepticism - I felt the same way! But when you're desperately trying to get an answer from the IRS on something specific like S Corp accountable plan depreciation treatment, and you keep hitting walls with preparers who give conflicting advice, sometimes going straight to the source is the only option. The agent I spoke with actually pulled up the relevant sections of the Internal Revenue Manual while we were talking.

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I've gotta eat my words and apologize to Profile 14. After reading your post, I was still skeptical but decided to try Claimyr as a last resort before filing my extension. Holy crap - it actually worked exactly as described! Got connected to an IRS business specialist in about 20 minutes (would have been hours if I'd called myself). The agent confirmed everything about how to handle S Corp home office depreciation through an accountable plan, and even emailed me the specific IRM sections that covered my situation. The key thing I learned is that I needed to make sure my corporate minutes and accountable plan explicitly stated the methodology for calculating depreciation reimbursements, and that I needed specific documentation showing how I calculated the business percentage of my home. The agent was super helpful and even walked me through exactly how to fill out the relevant sections of my S Corp and personal returns to make sure everything tied together properly. Definitely worth it for getting this complicated issue sorted directly from the source!

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One issue I don't see addressed here - make sure you're handling the state tax implications correctly too! I'm in California and they have different rules about S Corp home office deductions than the federal government does. Had to file amended returns for 2 years because my accountant missed this. For example, in CA, you might still have to deal with the 2% floor for unreimbursed employee expenses on your state return even if you're using an accountable plan federally. Caught me by surprise and cost me an extra $1,700 in state taxes I wasn't expecting.

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Dylan Cooper

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That's a really good point about state differences. I'm in Illinois - any idea if they have similar issues with home office deduction treatment that differs from federal rules? My CPA hasn't mentioned anything state-specific.

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Illinois actually follows federal treatment more closely than California does, so you're in better shape. The main thing to watch in Illinois is that they may require more detailed substantiation for home office expenses claimed through an accountable plan. Keep meticulous records of your business use percentage calculations, actual expenses, and corporate documentation authorizing the accountable plan. Illinois doesn't have the same 2% floor issue as California, but they do scrutinize S Corp transactions with shareholders more carefully during audits. Make sure your accountable plan reimburses you at fair market rates - especially for the depreciation component. If the numbers look too favorable, Illinois Department of Revenue might challenge it even if the IRS doesn't.

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Yara Nassar

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Has anyone actually gone through an IRS audit with an S Corp home office deduction including depreciation? Curious what documentation they asked for and how detailed the review was?

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My S-Corp got audited in 2023 (for tax year 2021) and they specifically targeted my home office deductions including depreciation. The auditor wanted EVERYTHING - home purchase documents from 15 years ago, all improvements, photos of the office space, a detailed floor plan with measurements, utility bills, insurance statements, and mortgage interest documentation. They also requested all corporate minutes that referenced the accountable plan, the written accountable plan document itself, proof of reimbursements (bank statements), and documentation showing how each expense was calculated. The depreciation component got the most scrutiny. They verified the basis calculation, business use percentage, and whether I had been consistent year over year. Had to provide prior year returns to show I hadn't changed my methodology. The good news is we passed with no adjustments, but it was incredibly stressful. My best advice: document EVERYTHING contemporaneously. Don't wait until an audit to try reconstructing records.

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Isaac Wright

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This is such a comprehensive discussion! As someone who went through a similar S Corp home office depreciation headache last year, I wanted to add one more consideration that nearly tripped me up. Make sure you're properly coordinating the depreciation method between your personal and S Corp books. I was using MACRS 39-year straight line for the business portion on my personal return, but my S Corp was trying to reimburse me based on a different calculation my bookkeeper had set up. The IRS expects consistency - the depreciation your S Corp reimburses you for should match exactly what you're claiming as a deduction on Schedule E. Also, don't forget about the Section 280A limitations! Even with an accountable plan, you can't deduct home office expenses (including depreciation) that exceed the gross income from the business use of your home. This rarely comes up, but if your S Corp is having a tough year, it could potentially limit your depreciation deduction even if the reimbursement goes through properly. One last tip: consider setting up your accountable plan to reimburse monthly rather than annually. It makes the cash flow smoother and creates a better paper trail for documentation purposes. My CPA said it also makes audits less likely to raise red flags since the transactions look more like regular business operations rather than year-end tax planning moves.

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Finnegan Gunn

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Great point about the Section 280A limitations! I hadn't considered that scenario where a struggling S Corp might create issues with the home office deduction limits. Quick question on the monthly reimbursement approach - how do you handle the depreciation component monthly? Do you calculate 1/12th of the annual depreciation each month, or do you handle depreciation separately as an annual reimbursement while doing the other expenses (utilities, insurance, etc.) monthly? I'm worried about getting the timing wrong and creating mismatches between the reimbursement income and depreciation deduction on Schedule E. Also, does the monthly approach create any additional bookkeeping burden for the S Corp? I'm trying to keep my corporate admin as simple as possible while still being compliant.

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