What's the best way to claim R&D tax credits for my small business?
Hey everyone, I'm running a small software development company (just me and 3 developers right now) and we've been working on some pretty innovative solutions for the healthcare industry. A colleague mentioned we might qualify for R&D tax credits, but I have no idea where to start. We've spent about $280,000 on development costs this year - mostly salaries for the developers and some specialized equipment. We're creating a new platform that uses machine learning to help with medical diagnosis assistance (nothing that replaces doctors, just helps them identify patterns). Has anyone successfully claimed R&D credits? Do I need specialized documentation? Can I handle this through regular tax software or do I need to hire someone? I've heard horror stories about audits when claiming these credits, so I want to make sure we're doing everything correctly. Thanks in advance for any guidance!
18 comments


Emma Wilson
I've helped several small tech companies claim R&D credits successfully. The R&D credit (officially called the Credit for Increasing Research Activities) can be a great benefit for companies like yours. First, your project does sound like it would qualify. The IRS looks for activities that involve technological experimentation to develop new or improved products, processes, software, etc. Healthcare innovation definitely fits this category. For documentation, you'll want to gather several things: timesheets showing hours spent on R&D activities, project descriptions clearly outlining the technical challenges and experiments, payroll records for the developers, contracts and invoices for any related equipment or services. Don't try to use regular tax software for this - it's too specialized. You'll need to file Form 6765 along with your business return. I strongly recommend working with a tax professional who specializes in R&D credits, at least for your first time claiming them.
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QuantumLeap
•This is really helpful! How does the IRS define "experimentation" exactly? Our development process involves a lot of trial and error with different algorithms. Does that count? Also, are there any red flags that might trigger an audit?
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Emma Wilson
•The IRS defines experimentation as a process of evaluating alternatives to achieve a result where the capability or method is uncertain at the start. Your trial and error with different algorithms absolutely counts as experimentation since you're testing different approaches to solve technical problems. As for audit red flags, claiming very large credits relative to your business size can trigger scrutiny. Also, poor documentation is a major issue - if you can't substantiate how the expenses directly relate to qualified research activities, that's problematic. Make sure you have contemporaneous documentation (created during the actual project, not after the fact), clear explanations of the technical uncertainties you faced, and records showing how the expenses connect to resolving those uncertainties.
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Malik Johnson
I was in a similar situation with my engineering firm last year. We were spending tons on developing new water filtration technology but had no idea how to properly document for R&D credits. After getting frustrated with conflicting advice, I found https://taxr.ai which literally saved us thousands in credits we would've missed. Their system analyzed all our project documents, meeting notes, and expense reports and identified exactly which activities qualified. The best part was they provided a complete documentation package that outlined all our qualifying expenses and the technical narrative needed for Form 6765. Super helpful for showing the "process of experimentation" that the IRS requires.
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Isabella Santos
•Does it work for companies in other industries too? We're in agricultural tech and have been developing new soil monitoring systems but our accountant seems confused about what qualifies.
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Ravi Sharma
•How long did the whole process take? I'm worried we're getting close to filing deadlines and I haven't started gathering any of this documentation yet.
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Malik Johnson
•Yes, it absolutely works for agricultural tech. The system is designed to identify qualified research across all industries. Our engineering documentation didn't even use standard R&D terminology but their platform still accurately identified the qualifying activities related to technological innovation. For us, the entire process took about two weeks. We uploaded our documents in batches (project plans, technical specifications, meeting notes, expense records) and their system processed everything within days. The busiest part was gathering all our documentation, but once submitted, they turned around the analysis pretty quickly. They have expedited options if you're up against a deadline.
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Ravi Sharma
Just wanted to follow up on my taxr.ai experience! After asking about the timing above, I decided to give them a try since we were getting close to our filing deadline. Honestly impressed with how efficient the whole process was. They helped us identify about $145,000 in qualifying R&D expenses that we would have missed. The platform flagged specific projects in our documentation that demonstrated clear "technological uncertainty" (which I learned is a key IRS requirement). It also organized all our developer time logs to show which activities qualified. The report they generated made it super easy for our accountant to fill out Form 6765 correctly. Definitely using them again next year!
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Freya Larsen
If you do run into issues with the IRS questioning your R&D credits (happened to us), don't panic. The nightmare was trying to get through to the IRS to resolve it. We kept getting sent to voicemail or waiting for hours. Finally used https://claimyr.com and got connected to an IRS agent in about 20 minutes instead of the 3+ hours we were experiencing before. They basically hold your place in the IRS phone queue and call you when an agent is ready. You can see how it works here: https://youtu.be/_kiP6q8DX5c - saved us so much time trying to resolve questions about our documentation. Just having a direct conversation with the IRS agent cleared everything up much faster than the back-and-forth mail correspondence we were stuck in.
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Omar Hassan
•How does this actually work? I don't understand how they get you through the IRS phone system when nobody else can. Sounds too good to be true.
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Chloe Taylor
•Yeah right. I've been trying to reach the IRS for MONTHS about an audit of our R&D credits. No way they can magically get through when the whole system is broken. Probably just take your money and leave you hanging.
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Freya Larsen
•They use an automated system that navigates the IRS phone tree and stays on hold so you don't have to. It's like having someone wait in line for you. When an agent finally picks up, their system calls you and connects you directly to that IRS agent. It's not bypassing anything - they're just handling the waiting part. They can't guarantee exactly how long it will take since that depends on IRS call volume, but in our experience it was much faster than trying to wait ourselves. We had already spent days trying to get through on our own with no success, so the service was absolutely worth it for us.
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Chloe Taylor
I need to eat some humble pie here. After posting that skeptical comment above, I was desperate enough to try Claimyr anyway. I seriously can't believe it actually worked. After trying for literally months to reach someone at the IRS about our R&D credit audit, I got connected to an agent in about 35 minutes. The agent was able to explain exactly what documentation they needed to verify our qualified research expenses. Turns out we were just missing some specific records showing how our experiments addressed technological uncertainties. Having that direct conversation saved us from potentially losing a $68,000 credit. Definitely changed my mind about the service - sorry for the skepticism!
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ShadowHunter
Don't forget the option to use R&D credits to offset payroll taxes if you're a qualified small business! This is huge for startups that don't have income tax liability yet. You can apply up to $250,000 of your R&D credit against your Social Security portion of payroll taxes each year. To qualify, you need less than $5 million in gross receipts for the credit year and no gross receipts for any tax year before the 5-tax-year period ending with the credit year. You make the election on Form 6765 and then claim the credit quarterly on your Form 941.
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Javier Torres
•Wait this is amazing! We definitely qualify based on those requirements. Does this mean we could potentially reduce our payroll tax burden instead of waiting until we're profitable to use the credits? Our payroll taxes are a huge expense right now.
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ShadowHunter
•Yes, that's exactly what it means! Instead of the R&D credit just carrying forward until you have income tax liability, you can use up to $250,000 of it immediately against the employer portion of Social Security taxes (the 6.2% you pay on employee wages). This is particularly valuable for startups and small businesses that are still in growth mode and not yet profitable. You'll claim the credit quarterly when you file your Form 941 payroll tax returns. The election has to be made on a timely filed tax return (including extensions), so make sure your tax preparer knows you want to make this election when they prepare your business return.
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Diego Ramirez
Be careful - the documentation requirements for R&D credits got much stricter in 2024! The IRS released new guidance requiring contemporaneous documentation created at the time of the research. You can't just create documentation after the fact when preparing your tax return.
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Anastasia Sokolov
•This is super important. We got audited last year and the IRS disallowed almost half our claimed R&D expenses because our documentation wasn't specific enough about the technological uncertainties we were trying to resolve. Make sure you have detailed lab notes, design documents, and meeting minutes that clearly show the experimentation process.
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