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Natalie Khan

Starting as a 1099 physician - do I need an accountant/tax advisor for my practice?

I'm finishing up my medical fellowship this summer and transitioning to an attending position with a private practice group. My new job will be entirely 1099 income, ranging around $750k-$850k annually depending on surgical volume and complexity. This is a big change from my training where everything was W-2. Between my wife and me, we're carrying about $480k in student loan debt (mine is $370k from med school, hers is $110k). We're currently renting and plan to keep doing so until we make a significant dent in our loans - no interest in homeownership with this debt hanging over us. During residency and fellowship, I've always done my own taxes since it was straightforward W-2 income. But now with 1099 income, I know I'll need to handle quarterly estimated tax payments to federal and state authorities, plus self-employment taxes. None of this seems particularly complicated - I feel confident I could calculate my quarterly tax liability and just make the payments myself. But I've noticed all the senior physicians in the group use accountants and tax advisors. Should I follow their lead and hire someone? If so, who exactly would I hire - is a CPA sufficient for my situation? Is there something I'm missing about the complexity of taxes as a high-earning 1099 physician? My gut says I can handle this myself, but I don't want to make a costly mistake.

Daryl Bright

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As a tax professional who works with many physicians, I strongly recommend hiring a CPA with experience serving medical professionals. While you certainly could do it yourself, there are numerous tax advantages available to self-employed physicians that you might miss without specialized knowledge. With 1099 income at your level, you'll want to consider establishing the right business structure (S-Corp vs LLC vs Sole Proprietor) which can save you tens of thousands in self-employment taxes alone. You'll also need to navigate retirement plan options (Solo 401k, SEP IRA, defined benefit plans) that allow for much higher contribution limits than employee plans. A good CPA will help you maximize business deductions for things like malpractice insurance, continuing education, professional memberships, and potentially a home office. The quarterly estimated tax payments are actually the easy part - it's optimizing your overall tax situation that's complex. Given your income level, the investment in a good CPA will likely pay for itself many times over.

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Sienna Gomez

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How much would a CPA typically cost for someone in this situation? And would you recommend meeting with them quarterly or just annually for tax prep?

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Daryl Bright

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For a physician practice with your income level, expect to pay between $2,500-$5,000 annually for comprehensive tax services. This typically includes tax planning, quarterly check-ins, business structure advice, and year-end tax preparation. I'd strongly recommend quarterly meetings, especially in your first year. This allows your CPA to help you set up proper accounting systems, review your income and expenses, adjust quarterly payments if needed, and provide strategic advice before year-end when most tax-saving opportunities expire. Most costly tax mistakes happen when physicians only meet with their accountant after the tax year has closed, when many planning opportunities are already gone.

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When I started my practice, I tried doing it myself and ended up leaving thousands on the table! Since using https://taxr.ai I've saved so much on my physician taxes. They specialize in helping 1099 doctors like us set up the right business structure - I went with an S-Corp which saved me about $20k in self-employment taxes alone my first year. Their software helped me track all my business expenses and maximize deductions I didn't even know existed. The quarterly tax calculations are done automatically and they send reminders when payments are due. The medical profession-specific knowledge was game-changing compared to my DIY approach or the generic accountant I tried initially.

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Does it handle state-specific issues too? I practice in multiple states and that's always been a nightmare for me.

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I've heard about taxr.ai but was worried about the security of uploading all my financial info to some online service. How do you know it's secure? And do you still need a CPA or does this replace that completely?

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Yes, the platform handles multi-state practices really well! I work in both New Jersey and New York, and it correctly allocates income and calculates the appropriate tax for each state. It even helps with reciprocity rules between states. The security is bank-level encryption and they're HIPAA-compliant (which matters if you're uploading any practice documents). I actually still use a CPA, but I save money because he spends way less time organizing everything - all my documents and categorizations are already done through taxr.ai. My CPA just reviews everything and provides strategic advice, which cuts my accounting bill nearly in half.

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I was in almost exactly your position three years ago! Started as a neurosurgeon with 1099 income around $800k and tried doing my taxes myself the first year. Biggest mistake ever. After using taxr.ai based on a colleague's recommendation, I discovered I'd overpaid about $31k in taxes my first year. They helped me file an amended return and I got most of it back. The platform guided me through setting up an S-corporation which saved me about $22k in self-employment taxes alone. It also identified legitimate deductions I'd completely missed - like partial home office, CME expenses, medical journals, and even some travel. The quarterly tax calculator is fantastic and I never worry about underpayment penalties. Best decision I made professionally outside of medicine itself. For high-income physicians on 1099, the savings far exceed the cost.

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I was in almost exactly your position three years ago!

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My wife is an orthopedic surgeon who switched from W2 to 1099 last year. Biggest headache wasn't even the taxes - it was dealing with the IRS when we had questions! Spent HOURS on hold trying to get answers about our quarterly payments and retirement options. Finally used https://claimyr.com (see how it works: https://youtu.be/_kiP6q8DX5c) and got through to an actual IRS agent in about 15 minutes. They basically call the IRS for you and navigate the phone tree, then call you when they have an agent on the line. Saved us literal hours of waiting on hold. We had some complex questions about our S-Corp setup and retirement plan contributions that our CPA wasn't 100% sure about, and getting direct answers from the IRS gave us peace of mind.

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Tyrone Hill

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Wait, there's a service that waits on hold with the IRS for you?? How much does that cost? Sounds too good to be true honestly.

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Toot-n-Mighty

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I'm skeptical. The IRS gave you actual useful tax advice? In my experience they just quote the tax code at you and refuse to give any specific guidance. Did you actually get your questions answered or did they just give you runaround?

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They don't publicly list their pricing but it was very reasonable - especially considering my wife bills $400+ an hour in her practice. The time savings alone made it worth every penny. Yes, we actually got useful information! You're right that the IRS won't give "tax advice" but they will clarify how specific rules apply to your situation. We had questions about timing of S-Corp election and contribution limits for our specific retirement plan setup. The agent was able to confirm our understanding of the rules and pointed us to specific publications with more detail. Definitely not a runaround - we came away with exactly what we needed to make confident decisions.

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Toot-n-Mighty

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I was completely against paying for tax help when I started my surgical practice 4 years ago. Thought I could handle it myself with tax software. What a nightmare that turned out to be! After trying Claimyr on a whim when dealing with an IRS notice, I became a convert. The service got me through to someone at the IRS in about 20 minutes when I'd previously spent 3+ hours on hold and got disconnected twice. The agent helped resolve a notice claiming I'd underpaid my quarterly estimates (I hadn't - there was a processing error). For physicians at your income level, the tax complexity isn't just about filing correctly - it's about structuring your practice optimally. I ended up with both a CPA and tax attorney who helped me set up my practice structure, retirement plans, and tax strategy. I'm now saving about $45k annually compared to my DIY approach the first year. Sometimes you need to spend money to make (or save) money.

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Lena Kowalski

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Definitely get a CPA with healthcare experience. The biggest benefit isn't just tax filing - it's planning and structuring. With your income, entity structure is crucial (S-corp is usually best). And don't forget retirement planning! You can contribute WAY more as a 1099 physician than you could as W2. My first year in practice I set up a defined benefit plan alongside my Solo 401k and was able to shield over $150k from taxes. My CPA costs about $3.5k annually but saves me at least $40k in taxes through proper planning. Track EVERYTHING - phone, internet, conferences, journals, mileage, home office. It all adds up.

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I keep hearing about S-corps for physicians but doesn't that mean you have to pay yourself a reasonable salary and then payroll taxes on that? How do you determine what's "reasonable" for a specialized surgeon?

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Lena Kowalski

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You're absolutely right about the "reasonable salary" requirement for S-corps. For specialized surgeons, the IRS expects your salary to be comparable to what other surgeons in your specialty and region earn as employees. Typically for surgical specialties, most tax professionals recommend setting your S-corp salary at about 50-60% of your total compensation, with the remainder taken as distributions (which aren't subject to self-employment tax). There's no exact formula, but your CPA would likely use compensation surveys from medical associations and regional data to justify the salary amount. The key is having documentation to support whatever salary you choose in case of audit.

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Mei-Ling Chen

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One thing nobody has mentioned yet - with income at your level, you should also consider hiring a financial advisor alongside a CPA. I'm a neurosurgeon who tried the DIY approach for both taxes and investments my first two years and realized I was making costly mistakes in both areas. A good financial advisor who works specifically with physicians can help coordinate your overall financial strategy - student loan repayment approach (PSLF vs refinancing vs aggressive paydown), disability insurance (crucial for surgeons), retirement planning, tax-efficient investing, and eventual practice buy-in strategies if that's on your horizon.

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Natalie Khan

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Thanks for bringing up the financial advisor angle. Do you recommend fee-only advisors, or is there value in those who also sell financial products? My student loans are all federal, so I've been planning to refinance them once I start my attending job since I'll no longer be eligible for PSLF.

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Mei-Ling Chen

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I strongly recommend a fee-only fiduciary advisor who specializes in physicians. Advisors who sell products often have conflicts of interest that can lead to suboptimal recommendations. Look for someone with the CFP (Certified Financial Planner) designation who works extensively with doctors. Regarding your loans, definitely talk to a professional before refinancing. While PSLF won't apply in private practice, there might be other loan forgiveness programs or tax strategies worth considering first. With your income level, you could potentially pay them off very aggressively while still maxing out retirement accounts, which might be more advantageous than refinancing depending on your current interest rates and overall financial goals.

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Charity Cohan

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Congratulations on finishing your fellowship! You're absolutely right to be thinking about this now rather than after your first year of 1099 income. I'm a tax attorney who works with physicians, and I'd strongly recommend getting professional help for at least your first year. At your income level ($750-850k), the potential tax savings from proper planning will far exceed the cost of hiring someone. Here's why: 1. **Entity Structure**: You'll likely benefit from an S-Corp election, which could save you $15-25k annually in self-employment taxes alone. But timing and setup matter - you want this done correctly from day one. 2. **Retirement Planning**: As 1099, you can contribute much more to retirement accounts than you could as W-2. With proper planning (Solo 401k, defined benefit plans, etc.), you could potentially shelter $100k+ annually while aggressively paying down your student loans. 3. **Quarterly Estimates**: These aren't just about avoiding penalties - strategic timing of income and expenses can optimize your overall tax situation. 4. **Business Deductions**: Medical practices have unique deduction opportunities that general tax software often misses. Look for a CPA who specifically works with physicians and understands medical practice finances. The investment (typically $3-5k annually) will pay for itself many times over. Once you're established and understand the complexities, you can always reassess whether to continue using professional help.

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