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Romeo Barrett

Navigating S-corp tax implications after inheriting my father's estate

I've recently been thrown into a complicated tax situation after my dad passed away three months ago. He was the sole owner of an S-corporation that I've now inherited through his estate. The business is still operating, but I'm completely lost when it comes to understanding how the S-corp's taxes work in relation to the estate and my personal taxes. The company made about $180,000 in profit this year before my dad's passing, and another $75,000 since I took over. I've been told different things by different people - some say the S-corp income automatically passes through to the estate, others say I need to file special forms since ownership transferred mid-year. My questions are: 1. How does the S-corporation's income get taxed now that it's part of an estate? 2. Do I need to file a separate return for the portion of the year my dad owned it versus when the estate took over? 3. What forms need to be filed for the S-corp, the estate, and my personal taxes? 4. Are there any specific deductions or tax planning strategies I should know about in this situation? I'm trying to be prepared for the upcoming tax season and don't want to make any mistakes that could cause problems with the IRS. Any guidance would be incredibly appreciated!

This is definitely a complex situation, but don't worry - we can break it down into manageable pieces. First, S-corporation income does "pass through" to its owners, meaning the business itself doesn't pay federal income tax. Instead, the profits pass through to the shareholders who report it on their personal returns. When your father passed away, the S-corp ownership transferred to his estate, so the income is split between two taxpaying entities for the year: your dad's final personal return (for income up to his date of death) and the estate (for income after his death). The estate is considered a separate taxpayer with its own tax ID number. You'll need Form 1120S for the S-corporation itself (this reports the business activity but doesn't calculate tax). The K-1 forms from the S-corp will show the split between your dad's portion and the estate's portion. Then Form 1041 is needed for the estate's tax return. As for tax planning, you should look into the "step-up in basis" rules which could be very beneficial regarding the valuation of the business assets you inherited.

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Justin Trejo

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Thanks for the explanation, but I'm still confused about the timing. My dad passed in September, so do we calculate exactly how much profit was earned before and after that date? Or is it done by quarters? Also, will I personally owe any taxes on the S-corp income for 2025 or does it all stay with the estate until the estate is settled?

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You'll need to do a cut-off based on the exact date of death. This means calculating exactly how much income the S-corporation earned up to that date, which goes on your father's final personal return, and then how much was earned afterward, which goes to the estate. Regarding your personal tax liability, it depends on how the estate is structured and distributed. If the estate distributes any of the S-corp income to you as a beneficiary during 2025, you would report that distribution on your personal return. However, if the income stays within the estate, the estate itself pays the taxes on that income via Form 1041. The estate will remain a taxpaying entity until it's fully settled and all assets have been distributed to the beneficiaries.

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Alana Willis

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Did you have to upload all your documents to their system? I'm always hesitant about sharing sensitive financial info online. How secure was the process?

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Sara Unger

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I wanted to follow up and say I ended up using taxr.ai for my situation with inheriting my mom's business interest. It was actually much better than I expected! The system identified that we needed to do a specific type of election with the IRS because the estate was going to hold the S-corp shares for more than 2 years. Without that election, the S-corp could have lost its status and created a huge tax problem. They also pointed out that some of the business losses from previous years could still be used to offset income, which my regular accountant had missed. The analysis showed exactly how to allocate income between the estate's tax return and the final individual return, with specific line references for each form. Honestly, it was like having an estate tax specialist but at a fraction of what I was quoted by local attorneys.

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When I was executor for my brother's estate that included an S-corp, the most frustrating part was trying to get answers from the IRS. I called literally 14 times and waited on hold for hours each time, only to be disconnected or told to call a different department. I eventually found this service called https://claimyr.com that got me through to an actual IRS agent in under 15 minutes! They have this system that navigates all the IRS phone menus and waits on hold for you, then calls you once an actual human IRS agent is on the line. You can see how it works in this video: https://youtu.be/_kiP6q8DX5c The IRS agent I spoke with was able to clarify exactly how to handle the S-corp income splitting between the decedent's final return and the estate return. They also confirmed which forms needed to be filed by which deadlines (some had different due dates than I expected). Saved me weeks of stress and probably prevented some penalties too.

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Freya Ross

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How does this actually work? Does someone else talk to the IRS for you? I'm confused about how they "navigate" the phone system.

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They don't talk to the IRS for you at all. Their system dials the IRS, navigates through all the automated menus using AI, and then sits on hold so you don't have to. When an actual IRS agent finally answers, their system calls your phone and connects you directly to that agent. You're the only one who talks to the IRS - they just handle the frustrating waiting part. It's not about "bypassing" the hold times - you still have to wait your turn, but their system does the waiting instead of you. And yes, there is a fee for the service that you pay upfront, but considering I wasted nearly 20 hours of my life trying to get through myself, it was absolutely worth it for me during such a stressful time dealing with my brother's estate.

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Leslie Parker

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I need to eat my words and apologize to Profile 5. After posting my skeptical reply, I was still stuck trying to get IRS guidance on my mother's estate S-corp issue, so I figured I'd try Claimyr as a last resort. I was SHOCKED when my phone rang 45 minutes later and an actual IRS estate tax specialist was on the line! The agent walked me through the exact procedure for handling the S-corp income allocation between my mom's final 1040 and the estate's 1041. They even emailed me the specific IRS publications that covered my situation and explained how to document the basis step-up for the business assets. For anyone dealing with estate tax issues, especially with business ownership involved, being able to actually speak with someone at the IRS who knows these niche tax areas makes a world of difference. Wish I had done this months ago instead of relying on contradictory advice from friends and online forums.

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Sergio Neal

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One thing nobody's mentioned yet is that you should check if your state has different S-corp rules than the federal government. Some states don't recognize S-corps the same way and might tax them differently, especially when there's an estate involved. For example, in Massachusetts, S-corps above certain income levels pay an entity-level tax in addition to the shareholder pass-through. When my uncle died and left his S-corp to his estate, we had to file both the federal forms others have mentioned PLUS additional state-specific forms for the S-corp income.

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Romeo Barrett

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I hadn't thought about state-specific rules at all. I'm in Tennessee - does anyone know if there are special S-corp rules here that might affect an estate transfer?

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Sergio Neal

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Tennessee is actually one of the easier states for this situation. Tennessee doesn't have a personal income tax, but they do have the Franchise and Excise (F&E) tax that applies to S-corporations. The good news is that the F&E tax is filed at the entity level, so the estate transfer doesn't complicate those filings much. What you'll need to ensure is that the S-corporation properly updates its ownership records with the Tennessee Secretary of State to reflect the transfer to the estate. The F&E tax return (FAE 170) will still need to be filed for the S-corporation as usual, regardless of the ownership change. The rate is 0.25% of the business's net worth for the franchise portion and 6.5% on net earnings for the excise portion.

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Has anyone addressed the potential need for a Form 8832 (Entity Classification Election) in this situation? When my father-in-law passed and left his S-corp to my husband, we had to file this to maintain the S election through the estate transfer process.

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Juan Moreno

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Actually, Form 8832 is for entities that want to change their classification. For maintaining an S-corp status during estate transfer, you probably filed Form 8553 (Election by a Small Business Corporation) or possibly a statement under Revenue Ruling 2008-18. The bigger issue is that estates are only allowed to hold S-corp stock for 2 years (3 years in some cases) before it terminates the S election.

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I went through a very similar situation when my mother passed last year and left me her S-corp. One critical thing I learned that hasn't been mentioned yet is the importance of getting the business properly valued as of the date of death for estate tax purposes and for establishing your stepped-up basis. The IRS requires a formal business valuation if the estate is large enough to require an estate tax return (Form 706), but even if you're below that threshold, having a professional valuation done can save you significant capital gains taxes if you ever sell the business later. The stepped-up basis rule means you inherit the business at its fair market value on the date of death, not what your father originally paid for it. Also, make sure you understand the quarterly estimated tax requirements. Since S-corp income passes through, the estate (and potentially you as beneficiary) may need to make quarterly payments to avoid underpayment penalties. The timing can get tricky when ownership transfers mid-year. I'd strongly recommend getting both a CPA experienced with estates and a business attorney involved sooner rather than later. The two-year limit on estates holding S-corp stock that Juan mentioned is real and has serious consequences if you miss it.

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This is incredibly helpful, Andre. I'm realizing I may have already made some mistakes by not getting a proper business valuation done yet. My dad passed in September and I've been so focused on keeping the business running that I didn't think about the stepped-up basis implications until now. Do you know if it's too late to get a retroactive valuation done as of his date of death? And when you mention quarterly estimated payments - does that mean I personally might owe taxes on the S-corp income even if I haven't taken any distributions from the estate yet? I've been reinvesting everything back into the business to keep it stable during this transition period. Also, the two-year limit is concerning - does that timer start from the date of death or from when the estate was officially opened? I'm not sure I'll be ready to either distribute the business or make any major decisions about it within two years given how complex everything has been.

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