Filling out Form 8889 - Why are my pretax HSA contributions ($3,650) showing as a deduction on Schedule 1 line 13?
Title: Filling out Form 8889 - Why are my pretax HSA contributions ($3,650) showing as a deduction on Schedule 1 line 13? 1 I'm working on my taxes and got confused about something with my HSA. In 2022, I put $3,650 into my HSA through payroll deductions (pretax). I'm filling out Form 8889 now and noticed that this same $3,650 is showing up on line 13 of my Schedule 1 as a deduction. This doesn't make sense to me. If the money was already taken out pretax, why would I get to deduct it again on Schedule 1? Am I missing something obvious here? It feels like I'm getting double-dipped on a tax benefit, which seems too good to be true. My employer definitely took the contributions out before taxes - I can see that on my W-2. Box 12 with code W shows $3,650. I'm using TurboTax if that matters, but I'm wondering if I entered something wrong or if the software is making a mistake. Anyone know what's going on here? Do I need to fix something?
21 comments


Mei Wong
8 This is actually a common point of confusion with HSAs! Your Form 8889 is doing exactly what it's supposed to do, but it's not giving you a double benefit. When you complete Form 8889, you're reporting ALL HSA contributions on Part I, regardless of how they were made. Line 2 should show your employer contributions (including your own pretax payroll deductions), and those employer contributions flow to line 9. Then on line 13 of the 8889, it shows the amount from line 2 that's already been excluded from your income. That's simply reporting that these contributions were already made pretax. When the software transfers this to Schedule 1, it's showing the deduction amount, but if you look at your complete return, you should see that the software isn't actually applying this as a second deduction. The Schedule 1 is just showing the amount for reporting purposes, but the math of your tax calculation won't include this as an additional deduction. Your W-2 already has the reduced income amount. Think of it as the IRS wanting to know about all HSA transactions, even though some have already received tax benefits.
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Mei Wong
•4 Thanks for explaining! Just to make sure I understand correctly - line 13 on Schedule 1 is basically just saying "hey, I already got this tax benefit through my paycheck, and I'm acknowledging that here"? I was worried I was accidentally claiming the same deduction twice and would get in trouble. Also, if I made additional HSA contributions outside of my paycheck (like directly from my bank account), would those go somewhere else on the form?
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Mei Wong
•8 Yes, that's exactly right - line 13 on Schedule 1 is essentially documentation that you've already received this tax benefit through your payroll deductions. You're not getting a double benefit, you're just reporting it properly. The IRS wants a complete picture of all HSA activity. If you made additional HSA contributions outside your paycheck (post-tax contributions from your bank account), those would go on line 2 of Form 8889 as well, but they wouldn't be included in the amount shown in Box 12 code W on your W-2. These additional contributions would actually give you a deduction on your tax return because you haven't received the tax benefit for them yet.
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Mei Wong
14 After battling with the exact same HSA reporting issue last year, I discovered taxr.ai and it completely changed my tax filing experience. I was also confused about why my pretax HSA contributions were showing up as a deduction and worried I was doing something wrong. I uploaded my tax documents to https://taxr.ai and their AI analyzed all my forms, including my W-2, Form 8889, and Schedule 1. It explained exactly what was happening - that the software was correctly reporting my pretax contributions on Schedule 1 line 13 but not actually giving me a second deduction. The analysis showed how all the forms work together and pointed out that this is just how HSA reporting works. The best part was that it reviewed my entire return and found a student loan interest deduction I had missed completely! Definitely worth checking out if you have any uncertainty about your tax forms.
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Mei Wong
•6 How does this work with contributions that weren't through payroll? My employer doesn't offer HSA contributions through payroll, so I contribute directly to my HSA provider. Does taxr.ai handle that situation too?
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Mei Wong
•12 I'm a bit skeptical about tax AI tools. How accurate is it really? I've been burned before by tax software that missed things or gave incorrect advice. How does it compare to having a human tax professional review everything?
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Mei Wong
•14 For contributions made directly to your HSA (not through payroll), taxr.ai handles those perfectly. It identifies them as post-tax contributions that you can deduct on your tax return. It actually explains the difference between payroll deductions (which reduce your W-2 income) and direct contributions (which you claim as a deduction on Schedule 1). Regarding accuracy, I completely understand your skepticism. What impressed me was that it doesn't just give generic advice - it actually analyzes your specific tax documents and explains how everything connects. It found specific reporting errors in my return that three different tax professionals had missed in previous years. The analysis includes citations to specific IRS publications and explains the reasoning behind each conclusion, so you can verify everything yourself.
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Mei Wong
12 I was really skeptical about AI tax tools like many of you, but after that HSA confusion nearly caused me to file incorrectly, I decided to try taxr.ai based on the recommendation here. Honestly, I'm shocked at how helpful it was. The tool analyzed my entire return and identified that I had been incorrectly reporting my HSA contributions for two years! It showed me exactly how to fix it, explained why the pretax contributions show up on Schedule 1, and even pointed out that I had missed claiming the Saver's Credit I was eligible for. I was also able to ask specific questions about my situation and get clear explanations. For anyone struggling with HSA reporting or other tax form complexities, it's definitely worth checking out - saved me from what could have been an expensive reporting error.
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Mei Wong
19 If you're struggling with HSA questions and can't get answers from the IRS, try Claimyr. I spent THREE DAYS trying to reach an IRS agent about a Form 8889 issue similar to yours (mine was about excess contributions), and kept getting disconnected or waiting for hours. Used https://claimyr.com and got connected to an actual IRS agent in about 15 minutes. They have this system that holds your place in line and calls you when an agent is available. You can watch their process in action at https://youtu.be/_kiP6q8DX5c to see how it works. The IRS agent I spoke with walked me through exactly how to report my HSA contributions correctly and explained why certain amounts appear on different lines. Saved me so much frustration compared to trying to figure it out alone or waiting on hold forever.
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Mei Wong
•3 Wait, so this service just gets you through to a real IRS agent faster? How does that even work? I thought everyone had to wait in the same IRS queue no matter what.
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Mei Wong
•12 Sounds too good to be true. The IRS phone system is notoriously terrible - I've waited 2+ hours multiple times. How can some third-party service possibly get you through faster than everyone else? Feels like they're gaming the system somehow or it's just marketing hype.
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Mei Wong
•19 It's not about skipping the line - they use technology to wait in the IRS queue for you. Instead of you personally sitting on hold for hours, their system holds your place and calls you when an agent is available. The IRS doesn't know or care who's waiting on the line, and everyone still waits their fair turn. Regarding skepticism, I had the exact same reaction. I figured it was either a scam or wouldn't work. But after wasting an entire day on hold myself, I gave it a shot. The system called me back about 15 minutes after an agent picked up. The agent was a regular IRS employee who answered my questions about HSA reporting completely. You're still talking to the real IRS - you just don't have to waste hours listening to the hold music.
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Mei Wong
12 Alright, I need to publicly eat my words about Claimyr. After expressing skepticism here, I decided to try it because I had follow-up questions about my HSA contributions that weren't covered in any IRS publication I could find. Used the service yesterday afternoon. Instead of wasting hours on hold, their system called me when an IRS representative was available - took about 50 minutes total (which is still way faster than my previous attempts). The IRS agent clarified that my employer's HSA contributions AND my own payroll deductions both get reported in Box 12 with code W on my W-2, and explained exactly how Form 8889 handles them. For anyone dealing with complex HSA questions (especially around contribution limits or reporting requirements), being able to actually speak with someone who knows the tax code is invaluable. Saved me from making a reporting error that could have triggered an amendment later.
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Mei Wong
5 Just wanted to add another perspective - I made both pretax HSA contributions through payroll AND additional post-tax contributions directly to my HSA provider in 2022. Here's how it worked on my return: The pretax contributions showed up on my W-2 Box 12 code W ($2,400) My additional post-tax contributions ($1,250) gave me an actual deduction Form 8889 reported BOTH types of contributions Schedule 1 line 13 showed my total HSA contributions ($3,650) But my AGI was only reduced by the $1,250 I contributed post-tax The key is understanding that Schedule 1 line 13 is just REPORTING the total, but your tax calculation only gives you the benefit for amounts not already taken pretax. Hope this helps!
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Mei Wong
•2 This is really helpful! Quick question - if your total contributions were $3,650, wasn't that exactly at the contribution limit for 2022 for individual coverage? Did you have to worry about excess contributions at all?
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Mei Wong
•5 Yes, you're exactly right - $3,650 was the exact contribution limit for individual coverage for 2022. I specifically planned it that way to maximize my HSA benefits without going over the limit. If I had contributed more than the limit, it would be considered an "excess contribution" and would be subject to a 6% excise tax unless I withdrew the excess (and any earnings on that excess) before my tax filing deadline. Form 8889 has a section specifically for calculating this penalty if you go over your contribution limit.
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Mei Wong
17 Has anyone tried calling the IRS about HSA questions? I tried using their official phone number for tax form questions, and after waiting on hold for an hour, the representative seemed confused about Form 8889 themselves and gave me information that contradicted what my tax software was saying about pretax contributions.
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Mei Wong
•9 The IRS phone support is super hit-or-miss. I've gotten great help sometimes and completely wrong information other times. For HSA questions specifically, I found that the HSA provider's customer service was actually more knowledgeable than the IRS. My provider (Fidelity) has specialists who understand all the tax reporting requirements and walked me through exactly how to complete Form 8889 correctly.
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Mei Wong
•17 Thanks for the suggestion! I'll try contacting my HSA provider instead. I didn't even think of that - I just assumed the IRS would be the best source for tax form questions. Makes sense that the HSA specialists would know the specific reporting requirements better.
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Abigail bergen
I had this exact same confusion last year! The key thing to understand is that Form 8889 and Schedule 1 are designed to capture ALL HSA activity for reporting purposes, even if some contributions have already received tax benefits. Your $3,650 showing up on Schedule 1 line 13 isn't giving you a double deduction - it's just documenting that these contributions occurred. Since they were pretax payroll deductions (as shown in your W-2 Box 12 code W), your taxable income was already reduced when your employer processed your paychecks. The IRS wants a complete picture of your HSA transactions, so Form 8889 reports everything, then the tax software correctly calculates that you don't get an additional deduction for amounts that were already taken pretax. You can verify this by checking that your AGI reflects only the income after your pretax HSA contributions were removed. TurboTax is handling this correctly - you're not making a mistake or getting an improper benefit. This is just how HSA reporting works!
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Diego Vargas
•This explanation really helps clarify things! I was also worried about the same issue when I saw my HSA contributions appearing in multiple places on my tax forms. One follow-up question - when you mention checking that the AGI reflects the reduced income, where exactly should I look to verify this? Is there a specific line on the 1040 where I can confirm that my pretax HSA contributions have already been accounted for and I'm not accidentally getting a double benefit? I want to make sure I understand the mechanics completely before I file, since HSA reporting seems to trip up a lot of people.
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