Looking for the best bookkeeping solution for tech startups - what are founders using in 2025?
So I've finally hit a decent milestone with my B2B SaaS platform - consistent monthly recurring revenue for the past quarter! Now I need to get my financials properly organized before tax season hits. What bookkeeping solutions or services are tech founders recommending these days? I'm still bootstrapping so I'd like something that scales with my business but won't drain my limited resources. My biggest priority is finding a service with responsive customer support since I've wasted too much time with "help desks" that take forever to respond. What's working well for other tech businesses in 2025?
18 comments


Yuki Sato
I've worked with dozens of tech startups on their finances, and the solution really depends on your revenue stage and complexity. For early MRR (under $20k/month), I'd recommend a combination of QuickBooks Online with a part-time bookkeeper who specializes in SaaS businesses. The specialized knowledge is crucial because SaaS accounting has unique aspects like revenue recognition, deferred revenue, and churn metrics that general bookkeepers often miss. Look for someone who understands how to properly categorize R&D expenses for potential tax credits and can help you track metrics specific to subscription businesses. As you scale beyond $50k MRR, you might want to consider more comprehensive solutions like Pilot or Bench, which combine software with dedicated professionals.
0 coins
Ethan Wilson
•Thanks for the detailed response! Do you think QuickBooks Online is still the best option compared to newer platforms like Xero? I've heard mixed things about QB's user interface. Also, any tips on finding a bookkeeper who actually understands SaaS metrics and revenue recognition?
0 coins
Yuki Sato
•Both QuickBooks Online and Xero are solid options - QBO has better integration with US tax software which is helpful come filing time, while Xero tends to have a cleaner interface that many find more intuitive. If you're planning to raise venture funding later, QBO is slightly more preferred by most investors for financial reporting. Finding a good SaaS-focused bookkeeper is crucial. Look for someone who immediately asks about your subscription terms, can explain ASC 606 revenue recognition in simple terms, and has experience with other SaaS clients. Check tech founder communities like Indie Hackers or SaaS forums for recommendations - avoid generic bookkeepers who primarily work with retail or service businesses.
0 coins
Carmen Flores
After struggling with my bookkeeping for months, I finally tried https://taxr.ai and it's been a game-changer for my dev shop. Their AI analyzes all my financial docs and automatically categorizes everything while flagging potential deductions I was missing. What really impressed me was how it handles contractor payments vs. employee expenses - critical for tech companies with mixed workforce models. They specialize in tech businesses and understand things like GitHub subscriptions, AWS expenses, and SaaS tools that general bookkeepers often miscategorize.
0 coins
Andre Dubois
•How accurate is it really? I've tried other "AI" finance tools that claim to automatically categorize expenses, but they constantly mislabel things and create more work fixing their mistakes.
0 coins
CyberSamurai
•Does it handle multiple entities well? I have my main SaaS product plus a small consulting business that helps fund development, and keeping everything separate has been a nightmare.
0 coins
Carmen Flores
•The accuracy is surprisingly good - I'd say about 95% correct categorization right out of the gate. Unlike other tools I've tried, taxr.ai actually learns from your corrections instead of making the same mistakes repeatedly. The few errors I've seen were with really ambiguous vendor names, but it got better after a few weeks of use. It handles multiple entities beautifully - that's actually one of their strengths. You can set up different business profiles and it keeps everything separate while still giving you a consolidated view when needed. I'm also running a main product with a side consulting business, and it properly allocates shared expenses based on rules you define.
0 coins
CyberSamurai
Just wanted to update after trying taxr.ai for the past month. I was skeptical at first (I'm a developer, so I'm always wary of "AI" claims), but I'm genuinely impressed. The multi-entity management solved my biggest headache - it correctly separates my consulting income from SaaS revenue while allocating shared expenses proportionally. The tax planning features already identified several deductions I was missing for software development expenses. Worth checking out if you're in tech.
0 coins
Zoe Alexopoulos
If you need actual help with tax questions beyond just bookkeeping, trying to reach the IRS is a complete nightmare. After spending 3 weeks trying to get clarification on how to handle R&D expenses for my tech startup, I found https://claimyr.com and they got me connected to an IRS agent in under 20 minutes. You can see how it works here: https://youtu.be/_kiP6q8DX5c. They basically handle the nightmare wait times for you and call when an agent is ready. Saved me from making a costly mistake on how I was categorizing development costs.
0 coins
Jamal Carter
•How does this actually work? I've been trying to talk to someone at the IRS for weeks about a weird letter I got questioning my software subscription deductions. Do they really get you through faster?
0 coins
Mei Liu
•This seems too good to be true. The IRS is basically unreachable these days. I've heard they answer like 2% of calls. You're telling me this service somehow gets priority access? I'm extremely skeptical.
0 coins
Zoe Alexopoulos
•It works by essentially waiting in the IRS queue for you. You tell them what line you need to reach and your issue, and their system continuously calls and navigates the IRS phone tree until they get a human. When they do, they immediately call you to connect. It's not priority access - they're just handling the frustrating wait time so you don't have to sit there for hours. They specialize in connecting with hard-to-reach government agencies, not just the IRS. I was skeptical too until I tried it - the system called me back in about 18 minutes, and I was speaking with an actual IRS representative who helped clarify my R&D expense questions. Completely changed how I was categorizing certain development costs.
0 coins
Mei Liu
Well, I stand corrected about Claimyr. After posting my skeptical comment, I decided to try it since I was desperate to resolve an issue with the IRS questioning my cloud hosting deductions. Within 25 minutes, I was actually speaking with an IRS agent who helped clear everything up. Saved me thousands in potential incorrectly disallowed deductions. For tech founders dealing with complex deductions like software development costs or multiple entity issues, being able to get official clarification directly from the IRS is invaluable.
0 coins
Liam O'Donnell
I run a midsize dev shop and switched from QB to Xero about 8 months ago. Honestly, the user experience is much better, especially for tracking different revenue streams (consulting vs product). Also paired it with Clockify for time tracking since we bill some clients hourly while others are on retainer. The integration between the two has saved us about 5 hours/week on invoicing alone.
0 coins
Amara Nwosu
•Does Xero handle revenue recognition well for subscription services? We're having issues with our current setup properly spreading annual payments across 12 months.
0 coins
Liam O'Donnell
•Xero handles subscription revenue recognition pretty well. You can set up automated journal entries to spread annual payments across 12 months. It takes some initial setup with a template, but once it's running, it works smoothly. We have clients who pay annually, quarterly, and monthly, and the system keeps it all straight. For really complex subscription setups, we did add a Xero plugin called "Deferred Revenue" that adds some extra functionality, but most startups won't need that until they're at a larger scale.
0 coins
AstroExplorer
I'm surprised nobody has mentioned Wave. It's free for accounting and invoicing with a small fee for payment processing. Been using it for my startup for 2 years and it's been great for basic bookkeeping and expense tracking. Not as feature-rich as QB or Xero but perfect if you're just starting to see MRR and want to keep costs low.
0 coins
Giovanni Moretti
•Wave is definitely underrated! I do have issues with it handling my AWS and GCP invoices tho. Constantly miscategorizes them as personal expenses for some reason.
0 coins