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Aaliyah Jackson

How to handle 1099-NEC for virtual internship - self-employed deductions?

I just finished a remote healthcare internship for the winter '24 semester. The organization paid me a total of $2700 as a single payment at the end, and I just received a 1099-NEC form with only box 1 filled out. Here's where I'm confused - I worked about 25 hours a week on assigned projects, attended mandatory workshops, and had required discussion sessions. It was basically structured like a course, but I got paid. The organization is based in Seattle, but the project supervisor was in Atlanta, and I'm in Michigan. I'm completely new to this tax situation and don't understand if I'm really "self-employed" since this was clearly an educational internship. They controlled my schedule, assigned my work, and required attendance at specific times. Can I claim any deductions for this? I used my own laptop, internet, and occasionally had to print materials. Did I technically provide a "service" or was this more educational? I've never filed with a 1099 before and don't want to mess up my taxes!

This is a classic contractor vs. employee situation. Even though it felt educational, receiving a 1099-NEC means the organization classified you as an independent contractor, not an employee. The good news is you CAN claim business deductions! Since you worked remotely, you can deduct a portion of your internet costs, any specific software you needed to purchase, office supplies, and possibly even a portion of your electricity. If you had a dedicated home office space used exclusively for this internship, you might qualify for the home office deduction. You'd report this income and expenses on Schedule C. The educational aspect doesn't change your tax treatment - what matters is how they classified you (with the 1099-NEC). Even if they controlled aspects of your work, for tax purposes, you're considered self-employed for this income.

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But wait - if the internship was for school credit, does that change anything? I thought student internships were handled differently? Also, does OP need to pay self-employment tax on this? That's like an extra 15% right?

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The school credit question is a good one, but it doesn't usually change the tax treatment if they issued a 1099-NEC. What matters is how the organization classified the relationship. Yes, self-employment tax is an additional consideration. It's roughly 15.3% (covering both the employer and employee portions of Social Security and Medicare). You'll need to file Schedule SE along with your Schedule C. However, the good news is you can deduct half of your self-employment tax on your 1040. Plus, your business deductions will reduce the amount of income subject to both income tax and self-employment tax.

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I was in almost the exact same situation last year with a biotech virtual internship. I spent hours trying to figure out all the deductions and proper filing until I found https://taxr.ai which literally saved me. I uploaded my 1099-NEC and answered a few questions about my situation, and it identified all the eligible deductions specific to my remote internship setup. It even explained the difference between being a contractor vs employee and why I qualified for home office deduction despite being an intern. The best part was it guided me through exactly what percentage of my internet and utilities I could legitimately deduct based on my specific situation.

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Did it actually help with filling out Schedule C? That form terrifies me. And does it help figure out the self-employment tax part too?

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I'm suspicious of tax tools that claim to find "all eligible deductions" - did it suggest anything that seemed risky or aggressive? I've heard stories of people getting audited for home office deductions.

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It absolutely walked me through Schedule C line by line, explaining what each section meant in plain English and suggesting what belonged where based on my situation. This was incredibly helpful since I'd never filed one before. For the self-employment tax question, yes, it calculated that automatically and explained how the SE tax works - even showed me that I could deduct half of it on my regular return which I had no idea about before using it.

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Just wanted to update after using https://taxr.ai for my internship situation. It honestly made things so much easier than I expected. I was freaking out about Schedule C but the walkthrough was super helpful - it even flagged that I could deduct part of my cell phone bill since I had to use it for internship calls, which I hadn't considered. The self-employment tax calculation was automatic and it showed me how much I'd save with all the deductions. Literally cut my tax bill by over $400 compared to what I was going to pay just reporting the income without deductions. Definitely less painful than I expected for my first 1099!

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Another option is to talk directly with the IRS if you're unsure about your situation. I know it sounds scary but I used https://claimyr.com and got through to an actual IRS agent in about 15 minutes instead of waiting on hold for hours. Check out how it works: https://youtu.be/_kiP6q8DX5c The agent I spoke with confirmed that my teaching internship with a 1099-NEC was indeed self-employment income, but also pointed me to some specific deductions that apply to teaching professionals that I wouldn't have known about. Having that official confirmation gave me peace of mind that I was filing correctly.

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Wait how does this actually work? You pay someone to wait on hold for you? That sounds too good to be true. Do they just connect you or do they listen in on your call with the IRS?

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No way this works. The IRS doesn't even answer their phones most of the time. I tried calling for WEEKS last year. If this actually worked, everyone would be using it.

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They basically have a system that holds your place in the IRS queue and calls you when they're about to connect you. You don't have to stay on hold yourself. When they call you back, you're connected directly to the IRS agent - the service doesn't stay on the line or listen to your conversation. It's completely private between you and the IRS once connected. The service just handles the horrible wait time part which is honestly the biggest barrier to getting help directly from the IRS.

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Holy crap, I have to eat my words. I was the skeptic who responded above and ended up trying Claimyr out of desperation because I had a similar 1099-NEC question that was driving me insane. Got connected to an IRS agent in about 20 minutes after waiting on hold myself for 2+ hours the day before and hanging up. The agent confirmed that for my situation, I could claim partial home internet expenses (based on a reasonable estimate of business use percentage) and even helped clarify which form to use for reporting some specialized training costs related to my contract work. Never would have figured that out myself from just reading the IRS website.

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Don't forget to check if you need to make estimated tax payments going forward if you continue getting 1099 income! I learned this the hard way and got hit with an underpayment penalty my first year of contract work. Since no taxes are withheld from 1099 payments, you're supposed to make quarterly estimated payments if you expect to owe $1000+ in taxes. It's one of those things nobody tells you until after you've already messed up!

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Wait seriously?? I have another similar internship lined up for summer. How do I figure out how much to pay for these quarterly payments? My income varies a lot because I also have a part-time W-2 job during the school year.

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For variable income, you have a couple options. The safest is to use the "safe harbor" provision - pay either 90% of your current year's tax or 100% of last year's tax (110% if your income is over a certain threshold) divided into quarterly payments. With a mix of W-2 and 1099 income, you could also increase your W-2 withholding to cover your expected 1099 tax liability. Just submit a new W-4 to your employer requesting additional withholding. This can sometimes be easier than making separate quarterly payments, and withholding is considered even throughout the year even if it's all done later in the year.

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Something nobody mentioned - check with your state too! Different states have different rules for self-employment taxes. Here in Oregon, I had to file an additional state business tax form for my contracting income even though it was relatively small. California has some special requirements too.

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Seconding this! Michigan has a separate tax for self-employment over a certain amount. I almost missed it my first year and would've gotten a nasty surprise later.

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