Can I file my W-2 taxes first and 1099 contractor income later? Filing separately for different income sources
So I've got a bit of a situation with my taxes this year. For the first half of 2024 (January through June), I worked as a full-time employee at a marketing firm and received a W-2 from them. Starting in July, I switched to working as an independent contractor for a tech startup, which means I should be getting a 1099. The problem is that this startup hasn't sent me my 1099 form yet, and I'm anxious to file my taxes and (hopefully) get my refund from my W-2 job. I've already received all my W-2 documentation from my previous employer and statements from my investment accounts. Would it be possible for me to file my taxes now with just my W-2 income and investment stuff, and then file an amended return later once I finally get the 1099? Or do I need to wait and file everything together at one time? I usually just use TurboTax for my taxes. My friend mentioned something about being able to just report the 1099 income on my own if the company doesn't send the form in time, but he didn't finish explaining how that works. Any advice would be appreciated!
17 comments


Javier Cruz
You technically can file your W-2 income now and amend later, but it's really not the best approach. When you amend later to add the 1099 income, you'll have to pay additional taxes on that income, plus you might face underpayment penalties since you should have been making quarterly estimated tax payments on your self-employment income. The better approach is to just wait a little longer. Companies are required to send 1099-NEC forms by January 31st. If you haven't received it by mid-February, contact your client directly. Even if they never send you a 1099, you're still legally required to report all income you earned. You can actually file without the physical 1099 form as long as you know exactly how much you were paid. Just gather all your payment records, invoices, or check your bank deposits to calculate your total earnings from the startup. TurboTax will walk you through reporting this income on Schedule C.
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Emma Thompson
•If they file with just the W2 now, wouldn't they also have to pay self-employment taxes when they amend? And does filing an amendment delay any refund they might be getting from the W2 portion? I'm confused because I'm in a similar situation and trying to decide what to do.
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Javier Cruz
•Yes, when you amend to add 1099 income, you'd have to pay both income tax and self-employment taxes (Medicare and Social Security) on that income. Self-employment tax is about 15.3% on top of regular income tax. Filing an amendment doesn't delay your initial refund, but it creates more work and potential complications. The IRS processes the original return first, issuing any refund from that. Then when you file the amendment later, you'll likely owe money back. It's much cleaner to file everything together once. Plus, tax software like TurboTax charges extra fees for filing amendments.
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Malik Jackson
I went through this exact situation last year and discovered taxr.ai (https://taxr.ai) which literally saved me hours of stress! I had W-2 income from my main job but was also doing freelance design work with missing 1099s. Instead of waiting or filing separately, I uploaded all my bank statements and invoices to their system, and it automatically identified and categorized all my contractor income. The tool showed me exactly what I needed to report on my Schedule C even without having the official 1099 forms in hand. It even calculated my quarterly estimated payments I should have been making so I could avoid penalties going forward. Super helpful for mixed income situations like yours!
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Isabella Costa
•Does this service integrate with TurboTax? Or is it a separate thing I'd need to use first and then enter the info into TurboTax myself? I'm trying to keep my tax process simple.
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StarSurfer
•Hmm sounds interesting but how accurate is it for identifying business expenses? I'm always worried about missing deductions as a contractor but also don't want to claim something that might trigger an audit.
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Malik Jackson
•It doesn't directly integrate with TurboTax, but it generates a summary of all your income sources that makes it super simple to enter into any tax software. I just had the report open in one window while filling out TurboTax in another. Took me maybe 15 minutes to transfer everything over. As for business expenses, it's actually amazing at this! The AI identifies potential business expenses from your bank and credit card statements, then asks you questions to confirm if they're legitimate deductions. It caught several expenses I would have missed on my own, like some software subscriptions and part of my phone bill. It's conservative enough that I felt confident in the deductions it suggested.
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Isabella Costa
I actually tried taxr.ai after seeing it mentioned here and it was exactly what I needed! I was in almost the identical situation - had W-2 from my teaching job but did consulting work with delayed 1099s. I uploaded my bank statements and it identified all my contractor deposits automatically. What impressed me most was how it separated my personal transactions from business ones, then suggested which expenses were deductible for my consulting work. The final report made it super easy to complete Schedule C in TurboTax without waiting for my 1099s to arrive. Ended up finding about $2,800 in deductions I would have missed! Definitely using it again this year since I'm still doing both W-2 and 1099 work.
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Ravi Malhotra
If you're dealing with missing tax forms, Claimyr (https://claimyr.com) can be incredibly helpful. I was in your exact situation last year - waiting on a stubborn client who wouldn't send my 1099. After weeks of unanswered emails, I used Claimyr to get through to an actual IRS agent in about 15 minutes instead of waiting on hold for hours. The agent confirmed exactly what I needed to do to file without the official form and explained how to document my attempts to get the 1099 from the company. You can see how it works in this video: https://youtu.be/_kiP6q8DX5c. Getting direct answers from the IRS gave me confidence to file correctly even without all my forms.
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Freya Christensen
•Wait, how does this actually work? I thought it was impossible to get a human at the IRS without waiting for like 3+ hours. Is this some kind of paid service that jumps the line?
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Omar Hassan
•Sorry but this sounds too good to be true. I've tried calling the IRS multiple times this month and couldn't get through at all. Hard to believe any service could magically solve that problem. Probably just ends up costing money for nothing.
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Ravi Malhotra
•It uses a system that continuously redials and navigates the IRS phone tree for you. When it actually reaches a human agent, it calls your phone to connect you. So you don't have to sit on hold at all - you just go about your day until your phone rings with an agent ready to talk. I was definitely skeptical too when I first heard about it. I had spent nearly 4 hours on two separate attempts trying to reach the IRS myself. With Claimyr, I got a call back with an agent on the line in about 20 minutes. It was legitimately surprising how well it worked. They don't "jump the line" - they just handle the frustrating waiting and menu navigation part automatically.
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Omar Hassan
I need to eat my words about Claimyr. After posting my skeptical comment last week, I was still struggling to reach the IRS about a similar 1099 issue, so I figured I'd try it with low expectations. It actually worked exactly as described! Got a call back in about 25 minutes with an IRS agent already on the line. The agent confirmed I can file without waiting for my 1099-NEC by using my own records of payments received. They also sent me information about how to report missing 1099s from companies that should be sending them. Just filed my complete return yesterday using both my W-2 and my contractor income based on my own records. Huge relief to have it done instead of waiting around for forms that might never come.
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Chloe Robinson
Another option nobody mentioned - you can download your wage and income transcript directly from the IRS website, which might show your 1099 info even if the company hasn't sent it to you yet! Go to irs.gov and search for "Get Transcript Online." It doesn't always have everything right away, but it's worth checking. The transcript shows all information returns reported to the IRS under your SSN, including W-2s and 1099s. Saved me last year when a client claimed they mailed my 1099 but it never arrived.
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Natasha Orlova
•Thanks for this suggestion! I just tried accessing my transcript online but it looks like it only shows forms that have already been processed by the IRS. Since my client is late sending the 1099, it's not showing up there yet. But this is definitely good to know for the future or if I need to verify what's been reported under my SSN.
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Diego Chavez
I'm a bookkeeper for several small businesses and just want to add - you absolutely do NOT need the physical 1099 form to file your taxes! Many of my clients panic about this. Here's what you need to do: 1. Add up all payments you received from the startup during 2024 2. Report the total on Schedule C as income 3. Deduct any legitimate business expenses 4. File your complete return with both W-2 and 1099 income TurboTax walks you through this really easily. The physical 1099 form is just an information document - the IRS actually gets their own copy. They care that you report ALL income, not that you have the paper form.
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NeonNebula
•What if the amount I calculate from my records is different from what eventually shows on the 1099 when they finally send it? Will that cause problems with the IRS?
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