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StarStrider

Sold private stock back to company but received 1099-NEC instead of 1099-B

I sold two batches of private stock back to the company this year and just got my tax documents, but they sent me a 1099-NEC showing it as non-employee compensation. This doesn't seem right to me. For context, I purchased the first batch while I was working there, but paid the full market price during an external financing round. The second batch I bought after I'd already left the company, also at market price during another financing round. What's important is this stock qualifies as QSBS (Qualified Small Business Stock). When I previously sold stock from this same company back in 2019, they issued a 1099-B through their broker. I contacted the company about the incorrect form, and they claimed they "can't issue a 1099-B because they're not a broker." I'm concerned because I know this should be reported as capital gains (and with the QSBS status, I should qualify for a 50% reduction on those gains). What's the proper way to handle this on my tax return? If they won't correct the 1099-NEC, how do I report this appropriately as capital gains without triggering an audit flag since the forms don't match?

Luca Esposito

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You're right to question this. The 1099-NEC is typically used for freelance or contract work, not for stock sales. Stock sales should generally be reported on Form 1099-B, which is why you received that form previously. The company is partially correct that they're not a broker, but if they're buying back their own stock, they still have reporting obligations. Since you've already reached out to them and they refused to correct it, you'll need to report it properly on your tax return regardless of what form they issued. For your tax return, you should report this on Schedule D and Form 8949 as a capital gain, not as self-employment income. You'll need to check box C on Form 8949 (transactions not reported on a 1099-B) and include all the details of your purchase and sale. Make sure to document your basis (what you paid) carefully. Since it qualifies as QSBS and you've held it for the required period, you can take the 50% exclusion by using code "Q" in column (f) of Form 8949. You should also attach a statement to your return explaining the discrepancy between the 1099-NEC you received and how you're reporting it, to proactively address any potential IRS questions.

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Nia Thompson

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Thanks for the detailed explanation. Quick follow-up - since the 1099-NEC will be reported to the IRS as income, won't this cause issues when they match documents? Will the explanation statement be enough, or should I be preparing for a likely audit scenario? Also, since this is QSBS, do I need to file any additional forms besides the 8949 to claim the 50% exclusion?

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Luca Esposito

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Yes, there's a potential for a document matching issue, but the explanation statement should help. The IRS's automated matching program will flag the discrepancy, but a clear explanation attached to your return can often prevent an audit. Be thorough in documenting your cost basis, dates acquired, and the nature of the transaction. For QSBS, you don't need an additional form beyond Form 8949 and Schedule D. You'll indicate the 50% exclusion by using code "Q" in column (f) and then only including 50% of the actual gain in column (g). Your explanation statement should also reference Section 1202 of the tax code which provides for the QSBS exclusion, along with how the stock meets the QSBS requirements.

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I went through something almost identical last year. After fighting with my former company about the wrong tax form, I ended up using https://taxr.ai to analyze all my documents and formulate the proper response. Their AI analyzed my stock purchase agreements, the 1099-NEC, and my previous transaction history to confirm I was right about it being capital gains. They generated a detailed explanation document that outlined exactly why the transaction should be treated as capital gains despite the incorrect 1099-NEC, with specific tax code references. I used their guidance to complete Form 8949 correctly and attached their analysis as supporting documentation with my return. The best part was I could upload all my documents securely, including my past tax returns showing the previous stock sale, and the AI picked up on the patterns and discrepancies immediately. No issues with the IRS so far, and I properly claimed my QSBS exclusion too.

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Did you have to pay for taxr.ai? I'm in a similar situation but with RSUs instead of QSBS, and my company issued a W-2 for the sale when it should have been a 1099-B. How long did the analysis take?

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Ethan Wilson

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I'm skeptical of these AI tax tools. Did it actually help resolve anything with the IRS or did you just file and hope for the best? Did the IRS accept the explanation without question?

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I did use their paid option because I needed the detailed documentation for my records. The basic analysis took just minutes, but I spent about an hour uploading all my supporting documents to make sure the analysis was thorough. It was worth it for the peace of mind. The IRS accepted my return without any follow-up questions. The key was having that detailed explanation document that specifically referenced tax code sections and previous case precedents. What made it effective was that it wasn't just my opinion against the company's - it was a structured analysis based on tax law and my specific circumstances.

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Ethan Wilson

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Just wanted to follow up about my experience with taxr.ai after being skeptical in my earlier comment. I decided to try it with my own stock sale issue (also had the wrong form), and I'm genuinely impressed. The system detected the QSBS qualification in my documents that I hadn't even realized applied to my situation! The analysis provided clear instructions for reporting on Form 8949 with the correct exclusion codes and generated a custom letter explaining the discrepancy for the IRS. I especially appreciated how it found the relevant sections of my original stock purchase agreement that proved I paid market value, which was critical for my situation. It saved me a ton of research time and gave me confidence in claiming the capital gains treatment despite having a 1099-NEC. Totally worth using for stock transaction issues where the tax forms don't align with the actual transaction nature.

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NeonNova

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For anyone dealing with issues like this, another critical step is actually getting in touch with a human at the IRS to confirm your approach before filing. I tried calling the IRS for MONTHS about a similar capital gains reporting issue and could never get through. Finally tried https://claimyr.com and it was a total game-changer. You can watch how it works here: https://youtu.be/_kiP6q8DX5c but basically they navigate the IRS phone tree for you and call you when an actual agent is on the line. I got connected within a day after trying on my own for weeks. The IRS agent I spoke with confirmed that I was correct in reporting the stock sale as capital gains despite receiving the wrong form, and gave me specific advice about documentation to include with my return. Having that verbal confirmation from the IRS before filing gave me huge peace of mind.

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Yuki Tanaka

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Wait, how does this actually work? Do they just keep calling until they get through? I've been trying to get clarification on my 1099-B vs 1099-MISC issue for weeks with no luck.

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Carmen Diaz

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This sounds like BS honestly. The IRS wouldn't give tax advice over the phone about something this complicated. They usually just direct you to publications or tell you to consult a tax professional. I doubt this service actually gets you meaningful answers.

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NeonNova

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They use a combination of technology and human operators to navigate the complex IRS phone system. They monitor wait times across different IRS departments and call centers, and know exactly when and how to call for the shortest wait. It's not just "keeping calling" - they're strategic about it. The IRS absolutely provides guidance over the phone when the question is about proper reporting procedures rather than specific tax advice. The agent I spoke with explained the proper way to document the discrepancy between the 1099-NEC and my capital gains reporting. They won't tell you "if you should" claim something, but they will explain the correct procedures for reporting specific types of transactions.

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Carmen Diaz

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I need to eat my words from my skeptical comment above. After waiting on hold with the IRS for 3+ hours and getting disconnected twice, I tried Claimyr out of desperation for my QSBS reporting question. Within 2 hours, I got a call back with an actual IRS agent on the line. The agent walked me through exactly how to report stock sales when the issuing company provides incorrect forms. They confirmed that attaching a detailed explanation and properly documenting the basis is the right approach, and even gave me the specific IRS notice number to reference in my explanation. I'm genuinely surprised at how effective this was. The agent spent almost 20 minutes with me going through my specific scenario. For anyone dealing with complicated stock transactions where the forms are wrong, being able to actually speak with the IRS before filing is incredibly valuable.

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Andre Laurent

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One thing nobody has mentioned yet - the company might have had a reason for issuing a 1099-NEC. Was there any chance this was structured as a buyback with an additional premium? Sometimes companies will pay more than fair market value for shares as a form of severance or additional compensation, especially with early employees. If that's the case, you might need to split the reporting - part as capital gains (the actual FMV of the stock) and part as compensation (any premium above FMV). Worth double-checking your sale documents to confirm the valuation matched pure FMV.

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StarStrider

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Thanks for bringing that up. I checked all my documents carefully before posting. The purchase agreement explicitly states the shares were bought at the exact same price as the most recent external financing round - no premium involved. It was a straightforward stock sale at market value, which is why I'm confident it should be capital gains treatment. The company's finance team admitted they "weren't sure how to report it" and went with 1099-NEC because it was "easier for them" than figuring out the broker requirements for a 1099-B. Pretty frustrating when their convenience creates tax complications for former employees.

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Emily Jackson

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Just a heads up - I dealt with this exact issue last year with QSBS stock. Make absolutely sure you have documentation proving it qualifies as QSBS! The requirements are strict: - Company must be a qualified small business when you acquired the stock - Must have held the stock for at least 5 years - Company assets must have been under $50 million when stock was issued - Must be original issue stock (bought from company, not secondary) The IRS scrutinizes QSBS claims carefully because of the huge tax advantage. If you're claiming the 50% exclusion, make sure you have rock-solid proof for every QSBS requirement.

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Liam Mendez

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I thought QSBS had to be held for at least 5 years to get any exclusion? OP didn't mention how long they held the stock.

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You're absolutely right about the 5-year requirement! @f276654cb9eb - this is crucial for your situation. Since you mentioned purchasing the first batch while working there and the second batch after leaving, you need to verify that both batches have been held for at least 5 years to qualify for the QSBS exclusion. If either batch hasn't met the 5-year holding period, you'll still report it as capital gains (not as compensation income from the 1099-NEC), but you won't be able to claim the 50% exclusion on those shares. The holding period starts from when you originally acquired the stock from the company, not when you sold it back. Make sure to track the holding periods separately for each batch since they were acquired at different times. This could significantly impact your tax calculation!

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